Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01107 ATGGGTGAGGAGGTGGAAGTGGTGGTGAGAGAGTTCGAGCCAAATAAAGACAGAGAGGGAGTAGGAGCTGTTGAGAGGATATGCGAAGTTGGACCCAGTGGCAAGATTTCCCTCTTCACCGACCTCCGCGGTGACCCTATTTGCAGGGTCCGCCACTCACCTACTTTCTTCATGCTAGTGGCTGAGATAGGCAATGAAATAGTGGGCATGACAAGAGGTTGCATCAAAACCGTTACATGCGGAAAGAAGCTCCATAGACACGGAAAAAACAACACTGCTGACTCCACCGCCAAACAAGTCCCTGTCTACACCAAACTAGCCTACATATTAGGCCTTCGCGTTTCACCACTCTACAGGAGAATGGGTATAGGTCTCAAGCTTGTACGGGCGATGGAGAAATGGTTTAGAGACAACGGTGCAGAGTACTCATACATGGCAACGGAAAACAACAACGTTGCGTCCATTAATCTCTTCACCGACAAATGCGGTTACTCAAAGTTCCGTACTCCGTCTATTCTCGTCAATCCCGTTTTCGAGCACCGGGTAAAAACCTCTTCCAAAATCAAAATCATAAAGCTTGACCAAAACGACGCCGAATCACTATACCGACTCAGATTCTCCACAACGGAGCTCTTCCCGCGCGACATTGACTCTGTTCTTAACAACAAGCTCTCACTTGGAACCTTTTTGGCGGTTCCGAGAGGGGGTTACGGGCCTGACACGTGGCCCGGCCCGGCACATTTTCTTGCTTCCCCGCCTCACTCCTGGGCCGTCCTCAGCATTTGGAACTGCAAAGAAGTGTTCTCACTTGAGGTGAGAGGCGTGTCGCGCGTGAAGCGGGCTTTAGCGAAAATGACACGTGTCGTTGATCGGGCTTTCCCATGGCTCGGGCTTCCTTCGATACCGAATTTCTTCAGGCCGTTCGGGTTTCATTTCTTGTATGGAGTTGGAGGGGAGGGACCTGAGGCGGTTAAGATGGTTCGGGCTTTGTGTGGGTTTGCACACAACCTGGCGAAAGAGAAAGGGTGCGGGGCGGTGGCGACGGAGGTTTCGAGGCTGGAACCGCTGCGGTTAGGAGTGCCGCACTGGAAGATGCTGTCGTGTGAGGAGGATCTATGGTGCATAAAACGGTTAGGGGAGGATTACAGTGACGGATCAGTTGGTGACTGGACCAAATCTCCCCCTGATTTTTCAATTTTCGTTGACCCTAGAGAGGTCTGA 1221 0.516 MGEEVEVVVREFEPNKDREGVGAVERICEVGPSGKISLFTDLRGDPICRVRHSPTFFMLVAEIGNEIVGMTRGCIKTVTCGKKLHRHGKNNTADSTAKQVPVYTKLAYILGLRVSPLYRRMGIGLKLVRAMEKWFRDNGAEYSYMATENNNVASINLFTDKCGYSKFRTPSILVNPVFEHRVKTSSKIKIIKLDQNDAESLYRLRFSTTELFPRDIDSVLNNKLSLGTFLAVPRGGYGPDTWPGPAHFLASPPHSWAVLSIWNCKEVFSLEVRGVSRVKRALAKMTRVVDRAFPWLGLPSIPNFFRPFGFHFLYGVGGEGPEAVKMVRALCGFAHNLAKEKGCGAVATEVSRLEPLRLGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPDFSIFVDPREV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01107 406 Pfam Acetyltransferase (GNAT) family 51 164 IPR000182 GO:0016407
Adu01g01107 406 Gene3D - 47 170 - -
Adu01g01107 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 166 IPR016181 -
Adu01g01107 406 PANTHER N-ACETYLTRANSFERASE 2 405 - -
Adu01g01107 406 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 2 405 - -
Adu01g01107 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 194 IPR000182 GO:0016407
Adu01g01107 406 CDD NAT_SF 58 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01107 Adu-Chr1 18897927 18899473 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Adu01g01107 Acetyltransf_1 2.7e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01107 - - gmx:100775317 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01107 01 18897927 18899473 Adu01g01107 01 18897927 18899473 ECH
Adu05g00598 05 6515138 6517734 Adu01g01107 01 18897927 18899473 PCT