Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01106 ATGCAGAAGGGTGGTGAGGAAGAAGATGGAATGACGCGACGTGCCTCTAACGTTTCTCTCTTTTTCTTCTATATCCACCTGGAAGTAAATGGCCATAAGGCCCTTCCAGTTCCAACAGACCTCCTTCTCCTTCTCCCTCTCGCGCGACGCGTTGCTTTCCGCCCTCCGCCAGCACTCGCCGCCGCCGAAACCCTGGCACAAAAGATTGGCAAGTCGACGCGCCGGCCCGGCGCGTCGTCCAAGGCAAGGGTTTACGCCGACGTCAACGTCGTTCGCCCTAAAGAATATTGGGACTACGAGACCCTCAACGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGCACCGATAACGAAAAATGCGTCATAAAGATCCTGAAGCCTGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATTTTACAGAATCTTTGTGGGGGGCCCAATATTGTAAAGTTGCTCGACATTGTTAGAGACCAGCAGTCAAAGACCCCAAGCCTTATATTTGAATATGTTAATAACACTGATTTTAAAGTGCTTTATCCCACATTGTCAGACTATGATATAAGATATTACATCTATGAACTTTTAAAGGCAAATTACTGCCACTCTCAAGGAATTATGCATCGGGATGTAAAGCCACATAATGTGATGATTGACCATGAGCAGCGAAAACTTAGGCTTATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTTCGCGTTGCGTCCAGATATTTCAAAGGCCCCGAGCTTCTTGTTGATCTTCAAGACTACGATTATTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATATTCCGGAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCGAAGGTACTCGGTACAGATGAATTAAGTGCATATTTAAATAAGTATCGCATAGAGTTGGACCCACATCTTGCAGCGCTTGTTGGGAGGCATAGCCGAAAGCCATGGACAAAGTTCATTAACTACGGTATGATCACCAAGAACGTCCAACTGCAAAAGAAGCCATGGCCCATCCTTACTTCAACCCAGTCAGAAATGCCGAAAGTAGTAGAAATCGAACAGATTGAGTTGCTGTCATTTGTTGAAATATGGTGCTTTCTCTTCGGTTGA 1221 0.4505 MQKGGEEEDGMTRRASNVSLFFFYIHLEVNGHKALPVPTDLLLLLPLARRVAFRPPPALAAAETLAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYETLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKANYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYRIELDPHLAALVGRHSRKPWTKFINYGMITKNVQLQKKPWPILTSTQSEMPKVVEIEQIELLSFVEIWCFLFG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01106 406 Gene3D Transferase(Phosphotransferase) domain 1 189 359 - -
Adu01g01106 406 Gene3D Phosphorylase Kinase; domain 1 112 188 - -
Adu01g01106 406 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Adu01g01106 406 CDD STKc_CK2_alpha 93 358 IPR045216 GO:0004674|GO:0006468
Adu01g01106 406 PANTHER CASEIN KINASE II SUBUNIT ALPHA 52 359 IPR045216 GO:0004674|GO:0006468
Adu01g01106 406 SMART serkin_6 112 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01106 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Adu01g01106 406 PANTHER BNAA04G13490D PROTEIN 52 359 - -
Adu01g01106 406 Pfam Protein kinase domain 112 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01106 406 SUPERFAMILY Protein kinase-like (PK-like) 83 345 IPR011009 -
Adu01g01106 406 ProSiteProfiles Protein kinase domain profile. 112 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01106 Adu-Chr1 18833696 18840397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01106 110 323 Core Cell Cycle Gene Families AT3G48750 35.398 2.90e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Adu01g01106 Pkinase 9.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01106 K03097 - egr:104418449 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01106 01 18833696 18840397 Adu01g01106 01 18833696 18840397 ECH