Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01093 ATGGCCGCCCTCGTCCCATTCAAACAAAAACTGCTCAAATATGAAACATTTGTCAAATCAAGTGCCTTGACGAGTTTGCACACAGACATGGGGCCTTTAATCCTATACTTTGTGGTGGTGGTGGTGGTGGTGATAATAGCGGCAGAGGTTGTGGGATCTGCTACAGAGGCATCTAATGGAAGACCGTATGTTCTTAAGACAATAGTTCAGTTTGCGATTGGAAAGGCTTGTGAAGAGGGAAAATGGGCGGCGGAGATTTGCAATCCAAGAAAAGGTGTTCGCGTTTGGGTTGGAACCTTCAACACCACCAAAGAAGCCGCTAGAGCCTATGACAGAGAAGGTCGTAAGATTCACGGAAAGAAAGCTAAAGCAAGGACTCTGAACCTCAACTTGGAGTTTGGTTACGATCTGAATCATGGAGGGTCCATTAGTATTGGTGTTGGTGGTGCCATCAACGCAGATCCGTTTGTGAGTTGTGTTGATGAGAATTCTGAGTATAGGCTTGGTTGCTACGATGTGGACAAAAAATGA 531 0.4557 MAALVPFKQKLLKYETFVKSSALTSLHTDMGPLILYFVVVVVVVIIAAEVVGSATEASNGRPYVLKTIVQFAIGKACEEGKWAAEICNPRKGVRVWVGTFNTTKEAARAYDREGRKIHGKKAKARTLNLNLEFGYDLNHGGSISIGVGGAINADPFVSCVDENSEYRLGCYDVDKK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01093 176 SUPERFAMILY DNA-binding domain 78 123 IPR016177 GO:0003677
Adu01g01093 176 CDD AP2 80 122 IPR001471 GO:0003700|GO:0006355
Adu01g01093 176 PANTHER DNA-BINDING DOMAIN 80 123 IPR044808 GO:0003700|GO:0009873
Adu01g01093 176 Gene3D AP2/ERF domain 75 132 IPR036955 GO:0003700|GO:0006355
Adu01g01093 176 Pfam AP2 domain 80 112 IPR001471 GO:0003700|GO:0006355
Adu01g01093 176 ProSiteProfiles AP2/ERF domain profile. 64 132 IPR001471 GO:0003700|GO:0006355
Adu01g01093 176 PANTHER EREBP TRANSCRIPTION FACTOR 80 123 - -
Adu01g01093 176 SMART rav1_2 80 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01093 Adu-Chr1 18336413 18338583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01093 80 142 AP2-EREBP Transcription Factor Family AT2G47520 57.143 4.65e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu01g01093 AP2 8.4e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01093 K09286 - gmx:100819416 97.4413