Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01090 ATGACTGTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCATATTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTCCTTTGCAAAGCTACATGAACCATTCTTGTAGTTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAAAAGAGAGGAAGACGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGCAAGTTGAGAAATCTAGAGAAGGGTCTTCCACAATACAAATTTATCTAAGCTGCGTCTCTGAAGGCTCCTTCTCTGCATTCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAAGATCCTTCCACAAGGCATCTGAAGTGGTTGAGCATCATTACGTGAATGCAAGTGATCTCAACTTGTTGAAGGCAAATGAAGCTGAAGCGTCCTTAACTGGAAGGGGTGCCTACACTCTTATGGTAGGACTCACCCTTATTCAAACTGCTGCCGCTAAACCTCGCTATCTTTCACTTGAAATTTCTGAAGGAAGCTTGCAGACAAGATTGCAGCTTCTGAACTTTCCTGCTGTGATTCGATCCTCTGCTGATTGGAAGAACACTAGGAAGAACAAGAAGTGCAGAAGGAGGAACACTAAAAAAAGCAGCATAACATGTCACCATAAACATGCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCAGGATGTATGGTGTGGCCCTGGAATTGAATTCACATTAGATCATGCTTCTGCTTATGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAGGGAAGAGACTTGTATAAACGTCCATGATCTTTAA 1038 0.421 MTVDLVVASPVEDYFLYIDDLKNPDKEEAEKITQPYLDALGEDYSVCCQGTAFFPLQSYMNHSCSSNAKAFKRDEDRDGQATIIAVRPIRKGKERKTWQRTARISLSSLMQVEKSREGSSTIQIYLSCVSEGSFSAFYLSQSYFFQGCSSPQGDKVQANSDQAMVWNQLKARSFHKASEVVEHHYVNASDLNLLKANEAEASLTGRGAYTLMVGLTLIQTAAAKPRYLSLEISEGSLQTRLQLLNFPAVIRSSADWKNTRKNKKCRRRNTKKSSITCHHKHASSSSSSSSFQDVWCGPGIEFTLDHASAYVDCVVARKNASSRRNLDAVERATHREETCINVHDL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01090 345 Pfam SET domain 44 94 IPR001214 GO:0005515
Adu01g01090 345 MobiDBLite consensus disorder prediction 260 278 - -
Adu01g01090 345 MobiDBLite consensus disorder prediction 259 290 - -
Adu01g01090 345 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 3 94 IPR044237 GO:0008168
Adu01g01090 345 SUPERFAMILY SET domain 33 94 IPR046341 -
Adu01g01090 345 Gene3D SET domain 20 95 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01090 Adu-Chr1 18250902 18255521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01090 217 328 C3H Transcription Factor Family AT1G73760 32.800 8.47e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu01g01090 SET 4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01090 - - aip:107628408 180.259