Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g01079 | ATGTATTTTCCTTTAGGAATAATTAGAGTATCTTTGTCTTGGATAAGGCTTCTTATTTGTTCAATTATGTGTTGGGGACCTTTCCTTCTTTTATGGTTTAGTTTTGAATTGCAGGCCTTGGACTACTGCCATTCACAAGGCATCATGCATAGAGACGTCAAGCCTCATAATGTTATGATAGATCATGAATTACGAAAACTTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAGTATAATGTTCGTGTGGCATCAAGATACTTTAAGGGCCCTGAACTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGGAAGGAGCCTTTCTTTTATGGTCATGACAATCATGATCAGCTTGTCAAAATAGCCAAGGTACTTGGGACTGATGAATTGAATGCATACCTGAATAAGTATCACCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGGCACAGTCGCAAACCTTGGTCAAAATTCATCAATGCAGATAACCAGCATCTTGTGTCTCCAGAGGCTATTGATTTTCTTGATAAGCTCCTTCGGTATGATCACCAGGACAGGCTAACGGCAAGAGAAGCAATGGCACATCCATATTTCTCTCAGGTAAGAGCTGCAGAAAGTAGCAGAATGCGGACACAGTAA | 705 | 0.4057 | MYFPLGIIRVSLSWIRLLICSIMCWGPFLLLWFSFELQALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g01079 | 234 | CDD | STKc_CK2_alpha | 37 | 220 | IPR045216 | GO:0004674|GO:0006468 | |
Adu01g01079 | 234 | SMART | serkin_6 | 2 | 220 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu01g01079 | 234 | Gene3D | Transferase(Phosphotransferase) domain 1 | 37 | 221 | - | - | |
Adu01g01079 | 234 | PANTHER | CASEIN KINASE II SUBUNIT ALPHA-3 | 36 | 234 | - | - | |
Adu01g01079 | 234 | ProSiteProfiles | Protein kinase domain profile. | 1 | 220 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu01g01079 | 234 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 48 | 60 | IPR008271 | GO:0004672|GO:0006468 | |
Adu01g01079 | 234 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 224 | IPR011009 | - | |
Adu01g01079 | 234 | Pfam | Protein kinase domain | 37 | 220 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Adu01g01079 | 234 | PANTHER | CASEIN KINASE II SUBUNIT ALPHA | 36 | 234 | IPR045216 | GO:0004674|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g01079 | Adu-Chr1 | 17863358 | 17867904 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g01079 | 33 | 227 | Core Cell Cycle Gene Families | AT2G38620 | 32.487 | 3.98e-32 | 115 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CK2 | Adu01g01079 | Pkinase | 3.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g01079 | K03097 | - | gmx:100813528 | 414.461 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g01079 | 01 | 17863358 | 17867904 | Adu01g01079 | 01 | 17863358 | 17867904 | ECH | |
Adu05g00607 | 05 | 6776767 | 6784829 | Adu01g01079 | 01 | 17863358 | 17867904 | PCT |