Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01073 ATGATGACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCACCTCGATTCATCGCCACCACACACTTTCCACGTCGTTGCACCACTCGCTAAATCCTCGGTTGTTGCTGCCTGCACTGCAGCACCCGTAGTTATTTCTGCTCAATTTTGCCTCTTAGTCTCACTCGAGTCTCGTCTTAGTAACACTACCGGCATCTTGTCGTTCATCTGTCTCGTTGCCAGCATCTCAACGTCTCATGGCCTTTCCTGTGCTCCTCGTCGCCAACGGCATAAGCAACTCGTGTGGTTGTTGATTGCTTCGTTGCCTTCTGTAGGGTTGTCGTCACTCGTCATCTTTTGGTTTTGGGTCCTCACCATCACTGTTGACCATGTACAGTTGACATCCCGCCTTCCACTTCTTGGTGGCTCTGTCGCTCTGTGCTGCCCCTCACTCTGCTCTCGCCACTCGCTGCGAGTCGTTGTCACTGCTGCTGTCATCGTCGCCTCGTCTGTGCTCGTATCAGTCGCCGTCGCCCTATCAGCTTCGTACCGTTCTGCTAACATGGACGAAAAGTTTGACACCGCTGACAAAAAGGTGCTGGTTGATATTGTAAAATTGGCACAAAAGAGAGGACTGAAAGGCGAATTCGGAGAATGGAAAGAATTTTTGAACAGTCATGATAAAAAGTTTGGGGCAGGTGTCAGTGACCCATCGAAGAGGTCCCATGAGATATTGGCTGCATTTCTGAAAACATTTTCAAATGAGGATGATTTGAAGTTTTTTGACAACATATTGCGCCATCATTCAAATCAGTATTTACTGGACCAATTGAAAGACAATTCACATGATTCTCCCTATCAGAGTCTAGTCCAACTAACTCTTCAGCACCCCTTGTATCCATTGGATTATTCATTTCCATCAATTGATGAGGGATGGATAATTTTAAACCTTAGGAAAAAAAAGATAATGAAGTCAACTGAAATGTTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCATTAGTAAAAGTATGTGTGGTAGACCATAATTTAGAGGTCAAGCTAAATGAACTTGTGAAACCGGAGAAAGAAATTGTAGACTATAGAACAGAGATTACTGGTGTTTCTTCTCAAGATCTAGTGGCAGTCACATGCTCCTTATCTGATATACAGAAATCCATGAAGAAATTGTTAGCAAATGGAGCCATATTAGTGGGACACAGTTTGCATAATGATCTCCGTGTGCTGAAGGTATATCATGTTAGAGTGGTTGATACTGCATATATCTTCCAATCCTCAGATGGATCACTTCACAGGAGACCTTCTTTAAATAATTTGTGCAAGGCAAGTTATGAAGTTCGAAAAGATGGAGCTCCACATAATTGTCTAGATGATGCACGTGCAGCAATGGAACTTTTTCTTGCAAGGATCAAGCATGGTGTTGATAAAGATTTTCCGGTTCAACTTCAAGAGCCAGTTTCTGAAAGTGAGATGGCAAAGCTGCTGCTTCATAAGATACCAACTACTGTAAACAGCGAAACACTGGATAAAGTTCTTCCTGGAGACTACACAATAGAAGTGAAGCCTTCCAAGAAAGCAGGACAAGGAAATAAATACTCTGCCTTTGCTATATTTAAGAATCCACTGGAAGCACACGATGCCTATGAAAGTATCCAAGGCACTGAATTAAAGGATTCAAATGGGATTCCGCAGAAGCTTGTCAAATTTCAGCTAGATACAGGTATGACTGCAAGTATTTTTGTTCGGAAGATGATGACACGTGAGCCTCGTGACTCTGTTGCGCTGAAGAGAGGTTTACAAACGGACGATGAAGTTCATGTTTCCAAGAAATCAAAGTGTGACAATGACGCCCAGTTGAAGGAGATTGAAGCACTGAATGAACGATTGAAGGAAAGCGAGTCAGAGATTGAATCTTTGAGGGAACAGCTGAAACAGAAGGATCTTGACATCGGGTCTTTGAGGGTAGAATTGAGTAAGAAGGATTATGAAATCAATATGCTCAATAAAATGGTAGCCTCCATAAAAAAGAGGGCAAGAAAGTAA 2061 0.4294 MMTPLSLSLSLSLSRHLDSSPPHTFHVVAPLAKSSVVAACTAAPVVISAQFCLLVSLESRLSNTTGILSFICLVASISTSHGLSCAPRRQRHKQLVWLLIASLPSVGLSSLVIFWFWVLTITVDHVQLTSRLPLLGGSVALCCPSLCSRHSLRVVVTAAVIVASSVLVSVAVALSASYRSANMDEKFDTADKKVLVDIVKLAQKRGLKGEFGEWKEFLNSHDKKFGAGVSDPSKRSHEILAAFLKTFSNEDDLKFFDNILRHHSNQYLLDQLKDNSHDSPYQSLVQLTLQHPLYPLDYSFPSIDEGWIILNLRKKKIMKSTEMFAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVKPEKEIVDYRTEITGVSSQDLVAVTCSLSDIQKSMKKLLANGAILVGHSLHNDLRVLKVYHVRVVDTAYIFQSSDGSLHRRPSLNNLCKASYEVRKDGAPHNCLDDARAAMELFLARIKHGVDKDFPVQLQEPVSESEMAKLLLHKIPTTVNSETLDKVLPGDYTIEVKPSKKAGQGNKYSAFAIFKNPLEAHDAYESIQGTELKDSNGIPQKLVKFQLDTGMTASIFVRKMMTREPRDSVALKRGLQTDDEVHVSKKSKCDNDAQLKEIEALNERLKESESEIESLREQLKQKDLDIGSLRVELSKKDYEINMLNKMVASIKKRARK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01073 686 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 183 592 - -
Adu01g01073 686 Gene3D - 614 683 - -
Adu01g01073 686 PANTHER SMALL RNA DEGRADING NUCLEASE 1-RELATED 183 592 - -
Adu01g01073 686 SMART exoiiiendus 322 481 IPR013520 -
Adu01g01073 686 CDD REX1_like 324 473 IPR034922 -
Adu01g01073 686 SUPERFAMILY Ribonuclease H-like 323 477 IPR012337 -
Adu01g01073 686 Gene3D - 318 488 IPR036397 GO:0003676
Adu01g01073 686 Coils Coil 621 662 - -
Adu01g01073 686 Pfam Exonuclease 325 472 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01073 Adu-Chr1 17576005 17590239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01073 300 417 C2H2 Transcription Factor Family AT3G27970 28.873 5.99e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01073 K14570 - gmx:100785565 709.138