Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01054 ATGCCTCCAACTCCACAAGAACACGAGCAACCCCTCTTACTGGACTCACCGCAACAAGCCGATGAGTTAGAAGAAACAGCCTACGATTCTTCCGAGAAGATCGTGGTAGTTGGAATCGACGAGTCAGAGTACGAGTCCGGGAACTGGGCCCGGGCCCCACCGTTCTCATGGAGGAAGCTATGGCTATTCACGGGCCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTGGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAGTCACCATAACTGCTCTTGATTGTTTTGTTTTTCTTCTTCTGGAGAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAATTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCATCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTCTATGGTACCGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGCAGTATGGGGGTGGATTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGTTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCCAGATTATTTCATGGCTCGTGACTGTTCTGGTGATAGTGATTAACGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACAGCTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACTTTCGTCTTCGTGCTTCACTCCAGCCTCAGCGTCCCACACCCACACACCCACTCCCACAGAACAACACCCACGAGGCCACCAGGCCACGACCCACCACGACCCACTGTGAGAGACAGAACGCCTGAAGCCCTCAACGCACTCACCTCCGTCGCGCCTTCAGCAGCGTCGCGACCTCAGCAGCTTCGCGGCCTCAGCAGCGTCGCGCCCTCAGCCTCTAATGAATTCAGTTGTTTAGACAACCATAAAGGACCATCAACAGCTCTGGTAACAACAGGATCAGTACTGGGATCATTTTTCCTTATCCTGCTTACCGGTGCGGTTTTAATAGCTTTTGCCCAAAAAGACTTGGCTAAACCTGCAGTTGGCAACATAGCTCGTGCTCTTTCTAAGAGAGTCATATTCATTCGCTCTGCTACAccattttgctga 1932 0.485 MPPTPQEHEQPLLLDSPQQADELEETAYDSSEKIVVVGIDESEYESGNWARAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVTITALDCFVFLLLENYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEQYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLQIISWLVTVLVIVINGYLLLEFFSHEVNGAIVGTVVCVLTAAYVAFIVYLISRAVTFVFVLHSSLSVPHPHTHSHRTTPTRPPGHDPPRPTVRDRTPEALNALTSVAPSAASRPQQLRGLSSVAPSASNEFSCLDNHKGPSTALVTTGSVLGSFFLILLTGAVLIAFAQKDLAKPAVGNIARALSKRVIFIRSATPFC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01054 643 MobiDBLite consensus disorder prediction 512 540 - -
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 194 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 378 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 350 369 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 412 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PRINTS Natural resistance-associated macrophage protein signature 169 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 Hamap Divalent metal cation transporter MntH [mntH]. 46 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 58 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 Pfam Natural resistance-associated macrophage protein 81 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu01g01054 643 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 19 503 - -
Adu01g01054 643 MobiDBLite consensus disorder prediction 524 538 - -
Adu01g01054 643 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01054 Adu-Chr1 16833923 16844933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01054 5 502 Inorganic Solute Cotransporters AT2G23150 77.200 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01054 K21398 - gmx:100807811 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01054 01 16833923 16844933 Adu01g01054 01 16833923 16844933 ECH
Adu05g00624 05 6971910 6975207 Adu01g01054 01 16833923 16844933 PCT