Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01009 ATGCATTACCTCCACTCACACTTGCTCCTTCTCATTTTGGTGTTAACCGCCGATGCCAGTCCCTCAACGGAAGTAAACACAATGCTACCATCCGACGCCGTTTCACTGCTCTCCTTCAAGTCAAAAGCAGACCTCGACAACAAGCTTCTATACGCCTTAAACGAGCGCTACGACTACTGCGAGTGGCAAGGAGTGAAGGGCACCTTCGCCGCCGACACACTCGCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCGTAACAACTCACTCTCCGGCACCATCCCTGACCTCTCCCCTCTTAAAAACCTCAAGTCCCTCTTCCTCGACCGTAACCGCTTTTCCGGAACGTTCCCGCTCTCGGTTCTCACGCTTCATCGGTTAGTTACTCTCTCACTCGCTCATAACGAGCTTGCCGGTCCGATTCCGGTTCGGCTCAACTCGCTCGACCGGTTAATCTCCCTCCGGCTGGATTCTAACTACTTTAACGGCACTCTCCCTGCGCTGAATTTGTCGTTTCTTGAAACGCTTGATGTTTCGAATAACAACCTTACCGGTCCCGTGCCTGTTACGCCCACGCTCGCGAAGTTCGATGCGCCGTCGTTTTCAGGAAACAATGACCTCTGCGGAGAGATTATCCACAAGCCATGCGATCGGCATTCTAGATTCTTCGGTGGCGGTGGCTCTTCTGCTGCCACGTCATCCGGCGCGCCGCTAGGGCAGAGCGAGCAGGGGATCGTGGTGGTTCATTCCCCGATCAAGGAAAGGAAGCACAAGAGCAGTGGATTGGTTCTCGGAATCTCCGTCGCGGCCGCGGTTCTCGTTGGCGCAGGGCTTGCGGCGGTTGCGGTGGCGAGGAAGAAGAATAGAAACAAGCAAGGGGGAATGCTCGGGGAAAAATTCGAGACGGAGAAAACGACGGCGTTGGAGGTTGAAACCGGAAGAAATAACCCTGCGCAGTTGGTGAGGGAAAGGGAAAACGAAAACGACGTCCTTTCAACGATGAAGGTGAAGAGGATAGAGGAGATAGAGAGGGCGCATAAGAGTGGGAAGTTGATATTCTGCTACGGTGAGGCGCAGCCGTACACGCTGGAGCAGCTGATGAGGGCGTCGGCGGAGCTTCTTGGGAGGGGGAGCGTGGGGACCACTTACAAGGCGGTTCTTGATTCGCGGCTGATCCTGACAGTTAAGAGAATGGACGCCGGGAAGACGGCAGCGATGAGCGGAGAGGTGTTTGAGAGGCATATGGAGATGGTTGGTGCTCTTCGGCACCCGAATTTGGTTCCGGTGAGGGCTTATTTTCAGTCCAAGGGCGAGAGGCTTGTCATCTATGATTATCAGCCAAATGGAAGCCTTTTCAATCTTGTTCATGGCTCAAGATCAGCAAGGGCAAAGCCCCTCCATTGGACATCATGCTTGAAAATAGCAGAAGATGTAGTTCATGGACTTGCTTATGTACATCAAGCTTCATCCTTAATTCATGGCAACCTAAAATCCTCGAATGTCCTTCTTGGACCAGACTTTGAAGCGTGCATTACAGACTACGGTTTGTCCTTTCTGGCAGATTCTTCGGTCGCTGAAGATGCCGATTCCACAGCCTATAAAGCACCAGAAGTCCGCCAGTCTAGCCGCAGGGCATCTTCCAAGTCTGATGTGTATTCTTTCGGCGTGCTTCTGCTGGAGCTTTTGACCGGTAAACACCCCTCTCAACACCCTGTGCTTGTGCCAACGGATTTGCAAGACTGGGTTAGAGCAATGAGGGATGACGATGATAGCGAAGACAACCGGCTCGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCTACCTCGCCAGAGCAGAGACCCGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGCGCAACATGA 1899 0.5313 MHYLHSHLLLLILVLTADASPSTEVNTMLPSDAVSLLSFKSKADLDNKLLYALNERYDYCEWQGVKGTFAADTLARLDQLRVLSLRNNSLSGTIPDLSPLKNLKSLFLDRNRFSGTFPLSVLTLHRLVTLSLAHNELAGPIPVRLNSLDRLISLRLDSNYFNGTLPALNLSFLETLDVSNNNLTGPVPVTPTLAKFDAPSFSGNNDLCGEIIHKPCDRHSRFFGGGGSSAATSSGAPLGQSEQGIVVVHSPIKERKHKSSGLVLGISVAAAVLVGAGLAAVAVARKKNRNKQGGMLGEKFETEKTTALEVETGRNNPAQLVRERENENDVLSTMKVKRIEEIERAHKSGKLIFCYGEAQPYTLEQLMRASAELLGRGSVGTTYKAVLDSRLILTVKRMDAGKTAAMSGEVFERHMEMVGALRHPNLVPVRAYFQSKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVVHGLAYVHQASSLIHGNLKSSNVLLGPDFEACITDYGLSFLADSSVAEDADSTAYKAPEVRQSSRRASSKSDVYSFGVLLLELLTGKHPSQHPVLVPTDLQDWVRAMRDDDDSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQEIKESAT 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01009 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 631 - -
Adu01g01009 632 SUPERFAMILY L domain-like 30 209 - -
Adu01g01009 632 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 7 631 - -
Adu01g01009 632 Pfam Protein kinase domain 371 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01009 632 ProSiteProfiles Protein kinase domain profile. 368 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01009 632 Gene3D Transferase(Phosphotransferase) domain 1 447 632 - -
Adu01g01009 632 Gene3D Ribonuclease Inhibitor 30 218 IPR032675 -
Adu01g01009 632 Gene3D Phosphorylase Kinase; domain 1 332 445 - -
Adu01g01009 632 ProSiteProfiles Leucine-rich repeat profile. 79 101 IPR001611 GO:0005515
Adu01g01009 632 SUPERFAMILY Protein kinase-like (PK-like) 372 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01009 Adu-Chr1 14995265 14999311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01009 16 631 Receptor kinase-like Gene Family AT3G50230 52.995 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu01g01009 Pkinase 5.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01009 - - gmx:100783086 757.288