Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01000 AGTTTGTGCACGTTCTTCGCCGACAAAGCACTGGGTTTCCAAGAGGAAGCTCTAAATATAGAGGTGTAACTTTGCACAAATGCGGAAGATGGGAAGCTCGAATGGGACAATTTTTAGGGAAAAAGTACGTCTATCTGGGTTTGTTTGACACCGAGATTGAAGCTGCAAGGGCCTATGATAAAGCAGCAATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTACGAAAATGAGCTTAATTCCGTAGAACCCACAGGTAATGCTGCAGATCACAATCTAGATTTAAGTTTGGGCAATTCAAGTTTCAAATCTAGCAACAATAATCGAGCATTGGGAAATCACACCACAAATGTTCAAGATCATCACCAGCAGCTCATGCCATCTGAATCCAATTGGCGAAATGGTGCAAGCAAGCCTAAGCTGGTGAATATCCTACCAAAACCGTGTAATAGAAACATGGAAGCACATGGAGGAAGGGATTTGCACGGAGAGAGTGAAGCCTTGAGGATGCTGAGTCAAACCCACATCCATTCTACTACTTGTTCAGCATCTAATGAAACGCAAAGATATGGACCCTACAGGTCCCCAGGGGAGCCTCAAATGCTTCACAATTTTGCACATCTTCAACCACCAAATTTTTATTTCTCCAGCAGCAGTAGTAATGGGGGTCGCATCGGGAATGATCTTTCATTATCAATGGCGGATCATCATCAACAACAGTTGCAACCAGGACCTCCACACCATTATTTGGCCACTGCTGCAGCATCATCAGGATTCCCACCACAGATTATTAGACCCTCTTCTCATCACCAAGGTTGGCTGCAGAAAAATGGCTTCCACACAATTATGAGACCCTCCTAA 875 0.4434 FVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSVEPTGNAADHNLDLSLGNSSFKSSNNNRALGNHTTNVQDHHQQLMPSESNWRNGASKPKLVNILPKPCNRNMEAHGGRDLHGESEALRMLSQTHIHSTTCSASNETQRYGPYRSPGEPQMLHNFAHLQPPNFYFSSSSSNGGRIGNDLSLSMADHHQQQLQPGPPHHYLATAAASSGFPPQIIRPSSHHQGWLQKNGFHTIMRPS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01000 290 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Adu01g01000 290 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Adu01g01000 290 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Adu01g01000 290 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Adu01g01000 290 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 288 - -
Adu01g01000 290 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 288 - -
Adu01g01000 290 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Adu01g01000 290 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Adu01g01000 290 Gene3D AP2/ERF domain 17 76 IPR036955 GO:0003700|GO:0006355
Adu01g01000 290 MobiDBLite consensus disorder prediction 89 126 - -
Adu01g01000 290 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01000 Adu-Chr1 14665001 14667610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01000 18 86 AP2-EREBP Transcription Factor Family AT4G36920 50.000 4.53e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu01g01000 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01000 K09284 - gmx:100792442 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01000 01 14665001 14667610 Adu01g01000 01 14665001 14667610 ECH
Adu05g00649 05 7337381 7344440 Adu01g01000 01 14665001 14667610 PCT