Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00978 ATGGAGTGGTGGGTGTCAATGCCAAAGGTGGAGTTGCATGCTCATCTCAATGGATCATTAGAGACTTCACACTGCTGTATAGAACTCATAAAGGCCTTAGGTGAAAAGGGTGGTGGAGCATATTATCATGAAGTAGAGCAGGCTTTTAGTGCATCTGGCAAAGCAGTGTCTGGTGGCATGTCCAGTGATGAAAAAAAATCAGGTATGCAGTATGAGCAATTTGCCAAGTTTGTGGCAGCTGCCATATTCTTGTGGACCTCGTATTACTCTATTGAAAATGCTAACTTAAGGATGTTCTCCTTTGCCACTTGTGAAATGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCGATAAAACAGCAAATATACATGTCTGTTATGGCGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGCTAACTAACAGCTGCCATAAACAGGAGGAAAACAAAATTCTAGAGAAAACACACCGCCAAAAGATTTTGGAAGTTGAAAAGCTTAGCCCAACTATTTAA 603 0.4212 MEWWVSMPKVELHAHLNGSLETSHCCIELIKALGEKGGGAYYHEVEQAFSASGKAVSGGMSSDEKKSGMQYEQFAKFVAAAIFLWTSYYSIENANLRMFSFATCEMHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSIKQQIYMSVMAESSTDLEPCCICQLTNSCHKQEENKILEKTHRQKILEVEKLSPTI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00978 200 Gene3D - 1 190 - -
Adu01g00978 200 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 105 168 IPR045191 GO:0061630
Adu01g00978 200 Pfam Microtubule-associated protein 70 176 200 IPR009768 GO:0007010|GO:0008017
Adu01g00978 200 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 105 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00978 Adu-Chr1 14006265 14008541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00978 105 168 C3H Transcription Factor Family AT2G15530 64.179 8.07e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00978 - K19041 ahf:112747303 156.377