Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00972 ATGCCCGACCACCTCACACCGCCAACAATGAACGACCAGCTCTCCAAGCAAACATCAATCTTCGGTCTCCGCCTCTGGGTGGTCGGCGGTGTCTGCGTCGGCGCCGCCATTGTCCTCATCCTCGTCCTCATCTCCCTCTGGCTCGCCTCCAAGCTCTCCACAACCAATAAGAGAAACCGCCACACCATTCCCGACGTCTCCAAAGAAATCCAAGAAATCAAGATAGAGCCCACCCATTCGTCTTCTTCTCCCAAGCCCGTTGGGCTTCCCTGCCAGCCCGACCCCACTCCTGAGCCGGACCCTCACCCGCCGCCACCAGAAGCAGAAGAAAGCAACAACTACAACAACGCGGCTTTGGGGTTTAAGAGAATTCAGTTTGAGATTGGGAAGAACCACAGAATATCGTACCCGGAACGGGCTTTCGTGAGGTCATCTTCGCAATCGAATCACGGAAGCGGAGAGGCATTGGAGCATAATCAGCAGGCTCCTACGGTGATCCCTGAGGTCTCGCATTTGGGTTGGGGACACTGGTACACCCTCAGGGAGCTTGAAGCTTCCACCAATAGCTTCGCCAACGACAACGTTATCGGCGAAGGAGGCTACGGGATTGTTTACCACGGCATCTTCAACGACAACACTCATGTTGCCATCAAGAATTTGCTCAATAATAAAGGTCAAGCTGAGAGAGAGTTCAAGGTTGAGGTGGAAGCTATAGGGCGAGTTCGGCATAAGAATCTGGTGAGGTTGCTCGGGTATTGTGCTGAAGGTGCTCATAGAATGCTTGTATATGAGTACGTTGATAACGGAAACTTGGAGCAATGGCTGCATGGCGATGTTGGACCTTGTAGTCCTCTCACTTGGGAAATTAGAATGAACATAATTCTTGGAACTGCAAAAGGattagcttatcttcacgaggggttggaacccaaagttgttcatcgcgacattaaatcgagcaatattttgattgacaagcaatggaattcaaaggtgtctgactttggacttgctaaaCTCCTTGACTCTGATAGCAACTACATTACGACTCGTGTAATGGGTACATTCGGATACGTAGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGCGATGTGTATAGTTTCGGAATCCTTATAATGGAAGTAATTACAGGCAGGAATCCTGTTGATTATAGTCGGCCATTGGAGCAGGTAAATTTAGTTGACTGGCTAAAGAAGATGGTTGGTAACAGAAATGCAGAGGGAGTGTTGGATCCCAAACTCCCTGAGAAACCGAATTCAAGGGCCCTAAAGAGAGTACTTATTGTAGCATTGCGCTGCACAGACTCAAATGCACAAAAGCGGCCTAAAATGGGACATATTGTACACATGCTTGAAGCTGAAGAATCCCCTTACAAAGAGGATCGTAGAGCTAGAAGGGAATCGGGATACACGCCCAAGAATAAAGTAAACGACAATCCAAAAGAGGAGGCAACTGTTTCCAGCGATGATTGTAGAACTGAAAGTGGGATGCAGGACAATGAGACAAAATGA 1542 0.4507 MPDHLTPPTMNDQLSKQTSIFGLRLWVVGGVCVGAAIVLILVLISLWLASKLSTTNKRNRHTIPDVSKEIQEIKIEPTHSSSSPKPVGLPCQPDPTPEPDPHPPPPEAEESNNYNNAALGFKRIQFEIGKNHRISYPERAFVRSSSQSNHGSGEALEHNQQAPTVIPEVSHLGWGHWYTLRELEASTNSFANDNVIGEGGYGIVYHGIFNDNTHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLDSDSNYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPLEQVNLVDWLKKMVGNRNAEGVLDPKLPEKPNSRALKRVLIVALRCTDSNAQKRPKMGHIVHMLEAEESPYKEDRRARRESGYTPKNKVNDNPKEEATVSSDDCRTESGMQDNETK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00972 513 MobiDBLite consensus disorder prediction 63 113 - -
Adu01g00972 513 Gene3D Phosphorylase Kinase; domain 1 154 265 - -
Adu01g00972 513 PANTHER OS01G0323000 PROTEIN 8 507 - -
Adu01g00972 513 PANTHER RECEPTOR-LIKE KINASE PLANT 8 507 - -
Adu01g00972 513 MobiDBLite consensus disorder prediction 451 513 - -
Adu01g00972 513 SMART serkin_6 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00972 513 CDD STKc_IRAK 196 462 - -
Adu01g00972 513 ProSitePatterns Protein kinases ATP-binding region signature. 196 218 IPR017441 GO:0005524
Adu01g00972 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Adu01g00972 513 ProSiteProfiles Protein kinase domain profile. 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00972 513 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00972 513 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Adu01g00972 513 MobiDBLite consensus disorder prediction 455 513 - -
Adu01g00972 513 MobiDBLite consensus disorder prediction 88 108 - -
Adu01g00972 513 Gene3D Transferase(Phosphotransferase) domain 1 266 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00972 Adu-Chr1 13838389 13842176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00972 126 507 Trihelix Transcription Factor Family AT1G70460 40.816 3.95e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu01g00972 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00972 - - lang:109350106 769.615