Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00965 ATGGATTGGGTAAGAGGAGACCCTGTTGGTCGAGGAAGCTTCGCCACGGTTAGTTTAGCGTTTTCAAAAAACAGTGCTGATAAATCTTTCATTTCTCCCACCGCCGTGAAGTCCTGTGAGGTTGGAGCCTCCTACTGGCTCAAGAACGAGAAACACGTGCTCGACCGTCTCGGCAACACGTGCCCACGAATCATCACGTGCTTTGGCGATGACTACACCTTGGAGAATGGCCGCCAATACTACAACCTCTTCCTAGAGTACGCCTCTCGAGGCAACCTCTCGGATGAGCTTGACCGCCGCGGAGGGTGTATCCCAGAGCTCGAAGTTCGGCACCACGTGAAGTCTATCGTAGAAGGCCTCATCCATATTCACAACACTGGATTCGCCCACTGCGACATAAAGCTTCAAAACATACTTATGTTCGAAAACGGTCAGGTTAAGATTGCGGATTTTGGTTTAGCGAAAGAAACAGGAGAGAAACAGGGGAATGAGAAGAAAAATAAGTGTTTCGAATGCAGGGGAACTCCTATGTTTATGCCGCCGGAATTGGTTAACAACGGCGAGTGCGAGTCTCCGGCGGATATTTGGGCCTTAGGGTGTACTGTAATAGAGATGGTGACTGGTAAGCCGGCATGGAACGTTGCAAAAGATTCGAATATTTGGTCTTTGATGCTTCGAATCGGAACAGGGGAAGAAGTTCCTTGTATTCCAGATAAAATTTCGAAAGAAGGGAAGGATTTCTTGGAGAAGTGTTTTGTTAAAAATCCTAAAAAGAGATGGACGGCTGAAATGCTTCTGAATCATCCGTTTCTGGCTTCTCATACTGTTTCATTGAAAGCTGGCTTCATGGCTAATAATTATTCTTCACCGCGAAGCCACTTTGATTTTTCAGACTGGGTTTGTTCTGTTCTGAGCTCTCACGAGCGCCAGTCGAATTTCAATTTTGATTCGTTTTCGGCCGTGAATCGAATTCAGAAGCTTGCGACAGAGGATCGAGTGCGGGAGAATTGGCCGGAATCTGATGGTTGGACTTGGACCAGTATCAGGGGGAATTAA 1056 0.4706 MDWVRGDPVGRGSFATVSLAFSKNSADKSFISPTAVKSCEVGASYWLKNEKHVLDRLGNTCPRIITCFGDDYTLENGRQYYNLFLEYASRGNLSDELDRRGGCIPELEVRHHVKSIVEGLIHIHNTGFAHCDIKLQNILMFENGQVKIADFGLAKETGEKQGNEKKNKCFECRGTPMFMPPELVNNGECESPADIWALGCTVIEMVTGKPAWNVAKDSNIWSLMLRIGTGEEVPCIPDKISKEGKDFLEKCFVKNPKKRWTAEMLLNHPFLASHTVSLKAGFMANNYSSPRSHFDFSDWVCSVLSSHERQSNFNFDSFSAVNRIQKLATEDRVRENWPESDGWTWTSIRGN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00965 351 Pfam Protein kinase domain 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00965 351 Gene3D Transferase(Phosphotransferase) domain 1 2 335 - -
Adu01g00965 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 315 - -
Adu01g00965 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 315 - -
Adu01g00965 351 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
Adu01g00965 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524
Adu01g00965 351 CDD STKc_MAPKKK 2 271 - -
Adu01g00965 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Adu01g00965 351 ProSiteProfiles Protein kinase domain profile. 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00965 351 SMART serkin_6 3 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00965 Adu-Chr1 13685702 13687118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00965 1 300 MAP Kinase Kinase Kinase AT5G67080 52.258 8.11e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu01g00965 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00965 - - aprc:113858661 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00965 01 13685702 13687118 Adu01g00965 01 13685702 13687118 ECH
Adu05g00668 05 7755826 7756863 Adu01g00965 01 13685702 13687118 PCT