Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00962 ATGGACACAATGATGATGCAAGTAGAAAGGTTACCTGAATTCTCCCAATCCTTTTACACCTCCATTCCCAATCAAGGAACTGACTTCTCCGGTGCCCAAACCATATTCAACGCACCACCAGCACCGCCGTGTTTGATTGATCCACCGCCGTCCAACAACGTCAACTTCCCCATCCAACACCAACCGATTGCATTCAGGAACCCTTACCATTGTTCTTCCTCATCGTCGGCGGAGAAGAAGAGTTCAATGGCGGCAATGAGAGAAATGATATTCCGAATAGCGGTTATGCAGCCGGTCCACATAGACCCGGAATCCGTAAAGGCGCCGAAGCGTAGGAACGTGAAGATCTCGAAGGATCCGCAGAGCGTGGCGGCGAGGCACCGGAGAGAAAGGATAAGCGAGAAGATAAGGATCTTGCAGCGGTTGGTGCCAGGTGGCACCAAAATGGACACTGCTTCTATGTTGGATGAGGCTGTGCACTACGTGAAGTTCTTGAAGAAGCAGGTGCAGACGCTGGAACAAGCAGAAGCAAGTAGAATAAGAAGAACCCTTGGTGTTGGGTTTTCTTCTTCTAATAACAGTGGCAATCATGTGAATTACGATGCTTTTTCTTTCAAGGGTAGTAGTAGTAGTTGCCAACAACTTTGTCATAATATTGTGGGTTCTACTTCTTCTTCCAAGTTACTCAGCTGA 693 0.4791 MDTMMMQVERLPEFSQSFYTSIPNQGTDFSGAQTIFNAPPAPPCLIDPPPSNNVNFPIQHQPIAFRNPYHCSSSSSAEKKSSMAAMREMIFRIAVMQPVHIDPESVKAPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKKQVQTLEQAEASRIRRTLGVGFSSSNNSGNHVNYDAFSFKGSSSSCQQLCHNIVGSTSSSKLLS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00962 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 165 IPR011598 GO:0046983
Adu01g00962 230 Pfam Helix-loop-helix DNA-binding domain 125 165 IPR011598 GO:0046983
Adu01g00962 230 Gene3D - 115 184 IPR036638 GO:0046983
Adu01g00962 230 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 34 203 - -
Adu01g00962 230 SMART finulus 122 171 IPR011598 GO:0046983
Adu01g00962 230 CDD bHLH_AtIND_like 117 173 - -
Adu01g00962 230 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 34 203 IPR045843 GO:0003700|GO:0006355
Adu01g00962 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 175 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00962 Adu-Chr1 13577166 13578160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00962 1 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 60.753 4.82e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g00962 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00962 - - gmx:100796649 221.476