Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00958 ATGGCAGCATCGCAAGAAGGACGTGTTTCAAGCGAGGATCCTCTTTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTCGATATAGTGGAACCTTTAGAGTGTGTAGCCTCTGACGAGCCAAGCAAGGTGAGCAATTTGGATCATCAAATCCTGCCATGGATGTTTATCGCCGCACAGTTGTCGGATGTTACAGATGTTGGAAGTGATGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCTTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCaaggctaactgcaGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGCAATCTTTTTGAGAGTTCAAGTGTGTTGTGCTGTCACTATCTTGCAGTTTTTCATTCGTATAAATTGTATAAAGTACCTACCTATTATATTCTCCCTCGATCGAGCAAGAACATAAAGTGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCAGATGAGAGTCATGTTGCATTCAGGGGACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGAATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACCAAAAATGGGATTAG 1311 0.4447 MAASQEGRVSSEDPLLCTSPSRNSLMEVDIVEPLECVASDEPSKVSNLDHQILPWMFIAAQLSDVTDVGSDEMELGDELPDHGCLQEDEIPRVGMRFAQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKANCRVSAVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTQELRCECNLFESSSVLCCHYLAVFHSYKLYKVPTYYILPRSSKNIKCKHTYVKSSHDVSRSDESHVAFRGLCAHFYNVAQEFLGDDEETALLHVALEETRAKLATHRAKKRSERMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMSLLSSFNQKWD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00958 436 MobiDBLite consensus disorder prediction 329 404 - -
Adu01g00958 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 173 330 IPR031052 GO:0006355
Adu01g00958 436 MobiDBLite consensus disorder prediction 1 20 - -
Adu01g00958 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 174 IPR031052 GO:0006355
Adu01g00958 436 MobiDBLite consensus disorder prediction 341 357 - -
Adu01g00958 436 Pfam FAR1 DNA-binding domain 105 181 IPR004330 -
Adu01g00958 436 PANTHER OS03G0843700 PROTEIN 173 330 - -
Adu01g00958 436 ProSiteProfiles Zinc finger SWIM-type profile. 216 252 IPR007527 GO:0008270
Adu01g00958 436 PANTHER OS03G0843700 PROTEIN 73 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00958 Adu-Chr1 13297738 13301981 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g00958 FAR1 1.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00958 - - aip:107640004 471.47