Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00954 ATGGGAAACAGTGAGGAAGAGAAATCTAGTCAGACTGAAAAGACTTCTCCACCTGAGCAGGCCAATATTCATGTCTATCCTGACTGGGCAGCCATGCAAATGTATTATGGGCCGAGAGTCGCCATACCACCATACTACAACCCTGCTGTGGCTTCTGGTCACACTCCTCACCCATACATGTGGGGGCCTCCTCAGCCTATGATGCCACCTTATGCAGCACTTTATTCACCTGGAGGGGTTTATACTCATCCTGCCATTCCTATTGGGTCACATCCACACGGACAAGGAGTTCCATCTTCACCTGCTACTGGGACACCTCTAAGTATGGAGACGCCAGCAAAATCTGCGGGTTTGATGAAGAAACTGAAAGGGTTTGACGGGCTTGCAATGTCAATTGGGAATGGCCATACTGATAGTACAGAGCTTAGAACTGAAAACAAGCTGTCACACAGTGTGGATACTGGGGGTTCTAGTGATGGAAGTGATGGCAACACTGTGGGGGCTAATCAAACACCAAGGAAAAGAAGCTGTGAGAGAACACCAGCCACTAATGAAGAAGGAAAACCTGAGATGCAAGCTAATCCAGTAACTCCAGCTTCTAACTCCAGCAATACTGTTTCAGGAAAGTTAGTTGGATCTGTAGTTTCTTCAGACACCACTACGGCGCTAGAGCTGAGGAACCCTACCAGTGTACATTCTAAAACAAATGCTGCAACTGCCCTGCAACCAGTATTGCCTGCTGAAGCTTGGATGCAGAATGAACGTGAGCTGAAACGTGAGAGGAGAAAACAATCAAATCGAGATTCTGCTAGAAGGTCCAGACTGAGGAAGCAGGCAGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAGTGCCGAAAATGTGTTGCTGAAATCAGAAATAAATCGACTCGCTGAAAGTTCTGGAAAGATGAGGGTGGAAAATGCTACATTAGGGGAAAAACTCAAAATCGTTCAGATGGTACAAACAGAAGGGATAATATTGAAGGGAATTGAAAGCAAGAGTGCAACACCTAAGAGTACAGAGAACTTATTATCAAGAGTCAACAATAATTCGAGTTCTAACGATACAAGCGGTGAGGACGAGAATGGTTTTTGTGACAAAAAATCAAACATTGGTCCAAAGTTGTATCAGCTACTGGATACAAGTCCTAGAGCTGATGCTGTAGCAGCCGGTTGA 1203 0.4539 MGNSEEEKSSQTEKTSPPEQANIHVYPDWAAMQMYYGPRVAIPPYYNPAVASGHTPHPYMWGPPQPMMPPYAALYSPGGVYTHPAIPIGSHPHGQGVPSSPATGTPLSMETPAKSAGLMKKLKGFDGLAMSIGNGHTDSTELRTENKLSHSVDTGGSSDGSDGNTVGANQTPRKRSCERTPATNEEGKPEMQANPVTPASNSSNTVSGKLVGSVVSSDTTTALELRNPTSVHSKTNAATALQPVLPAEAWMQNERELKRERRKQSNRDSARRSRLRKQAETEELARKVESLSAENVLLKSEINRLAESSGKMRVENATLGEKLKIVQMVQTEGIILKGIESKSATPKSTENLLSRVNNNSSSNDTSGEDENGFCDKKSNIGPKLYQLLDTSPRADAVAAG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00954 400 PANTHER G-BOX-BINDING FACTOR 3 1 400 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 225 285 - -
Adu01g00954 400 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 261 276 IPR004827 GO:0003700|GO:0006355
Adu01g00954 400 Coils Coil 247 267 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 136 209 - -
Adu01g00954 400 SUPERFAMILY Leucine zipper domain 257 309 IPR046347 GO:0003700|GO:0006355
Adu01g00954 400 SMART brlzneu 254 318 IPR004827 GO:0003700|GO:0006355
Adu01g00954 400 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 400 IPR044827 GO:0003700|GO:0006355|GO:0043565
Adu01g00954 400 MobiDBLite consensus disorder prediction 345 368 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 225 240 - -
Adu01g00954 400 Gene3D - 257 311 - -
Adu01g00954 400 CDD bZIP_plant_GBF1 259 307 IPR045314 GO:0003700|GO:0006355
Adu01g00954 400 Coils Coil 274 308 - -
Adu01g00954 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 256 319 IPR004827 GO:0003700|GO:0006355
Adu01g00954 400 MobiDBLite consensus disorder prediction 194 209 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 149 177 - -
Adu01g00954 400 Pfam bZIP transcription factor 254 316 IPR004827 GO:0003700|GO:0006355
Adu01g00954 400 Pfam G-box binding protein MFMR 1 87 IPR012900 -
Adu01g00954 400 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 252 285 - -
Adu01g00954 400 MobiDBLite consensus disorder prediction 345 379 - -
Adu01g00954 400 Pfam Disordered region downstream of MFMR 117 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00954 Adu-Chr1 13133940 13137348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00954 1 400 bZIP Transcription Factor Family AT2G46270 49.522 3.20e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu01g00954 MFMR_assoc 3.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00954 K09060 - gmx:100781875 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00147 05 1652893 1702276 Adu01g00954 01 13133940 13137348 PCT