LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g00928	ATGGAGAATGAAGTAGTGACGACAAGGGTGGAAGCGAATTCTCATCCTCATCACTATGGTGGAACCAAAAGCAGTTACGATGATGATGATGAGTATAATGAAGAAATAGTAGTAGGAGAGAAACCATCAAGATTGGAGGTATGGGGATGGTACGTGTACGAGTTGTGCTCCTACATGGTTCAGAGTGTTGTCATTCCTGTGGTGTTTCCCCTCATAATCAGTCAGCTACAGCAGCTCTCCACTGATGACCAAACCCTTCGCCACCAATGGATCAATAACCACCATGGCATGCCGTGTCCTCAAAAGCAAATTCTTCTGTATAGCAAGCTCACAAAGCGGACAATAAACATCACAGGCTCACACTTATCTTCGTTGGAATGGACATCAATTGCTTGGGGTGGAGGCCTACTCCTAGCTGCTCCAATTCTCGGATTCATCTCCTTCCACCTGGATGCCAATCAGTTCTACGCAATCATCACAGCTGCAGCCACAGGGGTTGGTGTCTTCTTTTGCCTGCCTGCCGGATTCTTCAAGACCACCAAGATCTTCATTCCCTACATCGCTGGGATCGCTCTTGCCGCCACCGTCGCCAGCACAGCACACACCCATTATCTCGCTCTCATGCTTCGTCCCTATGGAAAACCAACACCCGCCCTTAGGAGAAGAACCAGGTTCTTCCCAAGATTAAGTATCTCCAGCTGGTTCTCCCTCTATGCCACGGCTTTCGGTTCATTGGGTGCAGCTATCGTCTCATCCTTAACCTACCACATGCTTAGAGAACCCAGCGACCGTAACCTCTTGAGCCTTTGGGTTGTCTCAATCTTCAGTGGCCTCATATGGCTCGCCGGGGTGGTGCATGTTGTCCTCATTTCTCCCAGCAGAAGTGCCACCACTTGCTCCGTCTCACCTCTCTCCTCAAGGCTCTATCACTCCCTTTCTTTGTTCAAATACCCGCATGCAATTGGAGGCCTCTTTGGGGTTTTTCTGTCTTCTTTTGCCACGATGAGCATATTCACCGGAGGGGTGCTATTTGTGGTGGGTCAACTCTGCATGAGGCCAGTGCACCTGCTTTATTTGTGGTTGGTGTATTTCCTCTTCCCTTTGTTTTCTCTGCCGTTGCTTCAGATCATGCAGCACTTTATGAGGGTGAATTCCGTTAAGATGCAAATACTGGGTTTTCTGCTGTCCATGTTCTCTTCCGGGTCAGGGTTCTACTTTTGGGAGAGCCGCTGGAGATGGAGCCACTTGCTGCTATTTGGGGCGGTTCAGGGCACCGCAACAGGGCTGCTTCACGCTTTTGGGAGGGTGTTGGTGCTAAACTGTGCACCTTGCGGGAAAGAAGGTGCGTTCTCGGCGTGGTACGGATGGGTGAGATCCGTGGGGCTCTGTGTGGGGTTCACGGTGGGGTCGGTGGCTGCAGGACGCATTAGGGCCTCTCTTGGGGCCGCGTTTTGCTCTGGTATTGCTGGTATTGTTGTTCTTCTGTTTGGGAATGTGAGTGATGTCGGAGGTGCTGTTGCTGCTGGCCATGTCGCTGAGGATAATAGTGGTGACATCAGCGAGAGACCTTCCCGTTCCCATGTCGTTGCATCAAGCGGCTTAGATTCAAAGGAATCTGCTCAACAATCTTTTAGACGTCCAAAGCAAATAATAATCAGGCTCAAGGCTCAGGAGAGTGTTAGTGCTGAGACCATGGCAACTGCAACTAGTGGCACAACATCTaggctgcAGCTGAAAATCAAGCCTGATTCAAACTTCCTCTTCCCTTTGGTCAAGCCCGATTCAAACTTGCTCTTCCATTTGGTGGCCTACGGTGCATGGTTTGGTATTGGTTACATCAGCGATGCCAGCCTCATCCAGTCAAACAATCAAGAGAAGGCTGCATTGCAACACTTCCGAAAGAGAGCATCTTCCATGGCGTTTTCAACCCTGGAAGGCAGATCGATTAGTACATTGATCAATCCAACACAAGGCGATGAACAATTCAATGTGGGTGAATTAGACATTCAAGAGCAAGAAGGGTCATTGGTCGACGAACATACCGATGTCATTGTGACTAGAAAGGATGAGCTGGACGACGGACACGAATGGCGTAGCCGAAGAGAAAATTCCAGTCTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAAAAAGTTGGGTTCATTACTAAAATCAAGAACACAAATTTTGACAAGACGCAGAAGGAATCAAAGATACCAGTTAATCAATCTATCTACTGCACGCGAGAAAGTTATAGAGAGTCTAGGGTGAACACAGCAACTCGAGCAAATAGAATTACAGCCACGAGATGCAGAGCAAGGATGCATGGTCTGCCGTTTGCATCCTTTGTAGGTGTAAACCACCATGGGAAGTCTACTATTCTTGGCTGTGTTTTACTTGGGAGCGAGGAGATCCCTAATTTTGAGTGGGTGTTCACGCAGTGGGTGAGGTGTGTCAGGACTGCACCAAGGGGATTATCACTGACCACTGCAAGGCGATGA	2514	0.4873	MENEVVTTRVEANSHPHHYGGTKSSYDDDDEYNEEIVVGEKPSRLEVWGWYVYELCSYMVQSVVIPVVFPLIISQLQQLSTDDQTLRHQWINNHHGMPCPQKQILLYSKLTKRTINITGSHLSSLEWTSIAWGGGLLLAAPILGFISFHLDANQFYAIITAAATGVGVFFCLPAGFFKTTKIFIPYIAGIALAATVASTAHTHYLALMLRPYGKPTPALRRRTRFFPRLSISSWFSLYATAFGSLGAAIVSSLTYHMLREPSDRNLLSLWVVSIFSGLIWLAGVVHVVLISPSRSATTCSVSPLSSRLYHSLSLFKYPHAIGGLFGVFLSSFATMSIFTGGVLFVVGQLCMRPVHLLYLWLVYFLFPLFSLPLLQIMQHFMRVNSVKMQILGFLLSMFSSGSGFYFWESRWRWSHLLLFGAVQGTATGLLHAFGRVLVLNCAPCGKEGAFSAWYGWVRSVGLCVGFTVGSVAAGRIRASLGAAFCSGIAGIVVLLFGNVSDVGGAVAAGHVAEDNSGDISERPSRSHVVASSGLDSKESAQQSFRRPKQIIIRLKAQESVSAETMATATSGTTSRLQLKIKPDSNFLFPLVKPDSNLLFHLVAYGAWFGIGYISDASLIQSNNQEKAALQHFRKRASSMAFSTLEGRSISTLINPTQGDEQFNVGELDIQEQEGSLVDEHTDVIVTRKDELDDGHEWRSRRENSSLGSLPLAQKFYANYAKKVGFITKIKNTNFDKTQKESKIPVNQSIYCTRESYRESRVNTATRANRITATRCRARMHGLPFASFVGVNHHGKSTILGCVLLGSEEIPNFEWVFTQWVRCVRTAPRGLSLTTARR	837

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g00928	837	SUPERFAMILY	MFS general substrate transporter	44	496	IPR036259	-
	Adu01g00928	837	PANTHER	OS06G0113900 PROTEIN	29	539	-	-
	Adu01g00928	837	Gene3D	MFS general substrate transporter like domains	42	498	IPR036259	-
	Adu01g00928	837	MobiDBLite	consensus disorder prediction	1	26	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g00928	Adu-Chr1	12421165	12430460	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Adu01g00928		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g00928	-		-	adu:107474097	628.246