Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00895 ATGACCATGGATATGCCGTCATCAATGGGAAGCAGATCTTCCTTTGGCTCTAACAATGGCAATGAGGATACACCTGTTCACCCCTATGCTAATGTCTCTAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCTCCACACACACCATCAACTATGTCAATGGCTATTCCAGCAGAACTTGCTGGAGCTGTACCCTTAATTGACAAATTCCAGGTGGACGGATTTCTGAAATTAATGCAGAAACAAATCCATTCTGCTGGGAAACGTGGATTTTTCTCTAAAAAATCTGTAGGTCCTCAAACTCGAGAGAAGTTTACATTTGAGGACATGCTTTGTTTCCAAAAGGATCCAATACCAACATCATTGCTCAAGATAAATAGTGATTTAGTTAGCCGGGCAACAAAACTTTTCCAGATTATTCTGAAATACATGGGAGTTGATTCGTCTGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTTACTAAGCTATATAAGCAAAGTTTGAAGCGTTCAGAACTTCGAGATGAACTTTTTGTTCAGATATCAAAACAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCTTCCATGCCTCCTAGTAAAGATATAGGGGGTTATTTGTCGGAATATGTCCATAACGTAGCACATGGTGCAGCTACTGATTCTGAGATCCAAGCTCTTGCATTAAATACATTAAATGCTTTGAAGCGCTCTGTCAAGGCTGGTCCTAGGAACATAACACCCGGTCGTGAGGAGATTGAAGCTTTGATGACCGGGAGAAAGCTTACGACCATAGTGTTCTTCTTGGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGGCTTATTAAACTGTCAACTTATTCGACCTTTAGTCTGTTTGAATGTCACAAGGTCGTTACCGGCTCCAAATCATCCGACCCTGGGAATGGCATGTCCTTTTTTGACCTCTTCATGATTGAGTATGTCGGCCTTGATGATAACAAATATATTGGGGATCTCTTGGCGGAATTTAAAGCAGCAAAGGATCGAAGTAAGGGAGAAATATTGCACTGCAAACTGATATTCAAGAAAAAGTTATTCCGTGAGTCGGACGAAGCAGTGACGGATCCAATGTTTGTGCAGTTGTCTTATGTTCAGTTGCAGCATGATTATATTTTGGGCAATTATCCTATTGGGAAGGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTCTGAGCTCACCTGAAGCATGCACTGACTGGAATTCACTTTTGGAGCGATTCCTTCCACGACAAATTGCAATGACACGAGCAAAACGGGAATGGGAGATGGACATTCTTTCTCGTTATCATTCACTGGAGCATCTCAACAAAGATGATGCAAGACAACAATTTCTACGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTAGGAATTAACAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCAAAGGAATATTTGCACTCCGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGTAATACCGCAGTATTTTTTAAAATGCGAGTTGCTGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTAGCACTTCAAACACATATAAATGATGTAATGCTGCGCCGCTATTCAAAAGCACGGTCTGCTGCTACTGGTTCTTTGAATGGGGATATTTCTAATAATTTTAAGCCTCCTAACTTGGAGTTGTATGAGAAGCGTGTTAAAGATTTATCAAAGCTAGCTGAAGAATCGCAAAAAAATGTTGATCAATTGTATCAAGAATTGCATGAAAAGCAAAAACAAGAAAAGACGATGCAAGAAGAATTGGAGGGCTTGAAAGAATCCTTAAATGCTGATCGGAAAAATCTCGAGGAAGTTTCGAATGATCGTGATAGACTTAGATCATTATGCAGTGAAAAAGATAAGGCACTTCAGGCTGCAATTCTTGAGAAAAAGAACATGGAAGCAAAGATGGCCAAATTGAATAATCTAGTAGTAGAGAATGCTGCCAAAAAGGAACTCATTGGAACAAATAATCAAGTCTCACAAAAGCTTGAAAGTGAACTAAAACTTTGTAAAGAGGAGTTGCAAGCAGCTGAAGAAACTATCAAAAGCTTAACGGATGAAAAAGTGATTTTGGCAGAGAAACTATCTGTGCTTGAGAAGAGAAGTTCTGAAGAGATTACGTCTCTTCAACGGAAACTTGAGCAAGAACGCAAGCTTACAAAGTCTCAAGTGTTTGAGCTTGAAAAGAAGCTAGAAGGGCTTAGACAAGAATTAGTGCTTGCAAAGTCTAATATTTCAGTAAAGGACTCTGAGTTGGCTGCTTTGCAAAATAATTTGAAGGAATTAGAAGAATTGAGAGAATTGAAAGAGGACATTGATAGAAAGAACGAACAAACGGCTGCTATATTGAAGATGCAAGGGGCTCAACTAGTTGAAATGGAAGCGCTTTATAAGGAAGAACAAGTTTTAAGGAAACGTTATTATAATACAATAGAAGATATGAAAGGCAAAATTAGAGTTTATTGTCGGCTAAGACCTCTTAGCGAAAAGGAGATTGCCGAGAAAGAAACACAAGCGCTTGCTGTGGTGGATGAGTTTTCGGTCGAGCATATGTGGAAAGAAGATAAGCCAAAGCAGTATGTATATGACCGTGTGTTTGATGGTGGTGCAAGTCAAGAGAGTGTATTTGATGATACAAAGTATTTGGTGCAATCTGCTGTGGATGGATATAATGTCTGTATATTTGCTTATGGTCAAACCGGTTCTGGAAAGACATTTACCATCTATGGAAGTGAAAACAACCCCGGACTTACCCCTCGTGCAACTGCCGAGCTTTTTAGAATTTTAAGGAGAGATAATAGCAAGTATGCCTTTTCGTTAAAGGCATACATGGTAGAATTATATCAAGATACCCTTATAGATCTTTTGTTACCTAAGAATGCAAAACATTCAAAGTTGGAGATCAAGAAAGACTCAACGGGTATGGTGGCTGTGGAAAATGTAACAGTTCGGCCAATTTCTAAAATAGAAGATTTGAATAATATAATACAAAGAGGATCCGACCGGCGCCATACATCGGGTACACAAATGAATGAAGAAAGTTCAAGATCTCATCTCATTCTATCAGTTGTCATTGAGAGTACCAACCTTCAAAGTCAAGCAGTTGCAAGGGGAAAGTTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGGGTGAAGAAATCGGGTTCAGTAGGTAGCCAACTCAAGGAAGCTCAAAGCATTAACAAATCGTTATCAGCACTTGGGGATGTGATTAGTGCTTTGTCTAATGGTGGTCAACACATTCCTTATAGGAATCACAAATTAACTATGTTAATGAGTGATTCCCTTGGTGGTAATGCTAAAACTCTCATGTTTGTAAATGTTTCTCCAGTAGCATCAAACTTAGACGAGACGCATAACTCGCTTATGTATGCATCGCGAGTGAGGTCAATAGTGAATGATCCTAGCAAGAATGTTTCTTCGAAAGAGATAGCACGACTGAAGAAGTTGGTTGCTTACTGGAAAGAGCAGGCTGGTAGAAGAACCGAGGAGGAAGAATTGGAAGAAATTCAAGAAGAAAGACCAATTAAAGACAGGACAAGCTGGTAA 3810 0.3934 MTMDMPSSMGSRSSFGSNNGNEDTPVHPYANVSNGDDYDSDSSNFAPHTPSTMSMAIPAELAGAVPLIDKFQVDGFLKLMQKQIHSAGKRGFFSKKSVGPQTREKFTFEDMLCFQKDPIPTSLLKINSDLVSRATKLFQIILKYMGVDSSDRVTPISLDERVELVTKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVAHGAATDSEIQALALNTLNALKRSVKAGPRNITPGREEIEALMTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSTFSLFECHKVVTGSKSSDPGNGMSFFDLFMIEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPIGKDDAAQLSALQILAEIGFLSSPEACTDWNSLLERFLPRQIAMTRAKREWEMDILSRYHSLEHLNKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAATGSLNGDISNNFKPPNLELYEKRVKDLSKLAEESQKNVDQLYQELHEKQKQEKTMQEELEGLKESLNADRKNLEEVSNDRDRLRSLCSEKDKALQAAILEKKNMEAKMAKLNNLVVENAAKKELIGTNNQVSQKLESELKLCKEELQAAEETIKSLTDEKVILAEKLSVLEKRSSEEITSLQRKLEQERKLTKSQVFELEKKLEGLRQELVLAKSNISVKDSELAALQNNLKELEELRELKEDIDRKNEQTAAILKMQGAQLVEMEALYKEEQVLRKRYYNTIEDMKGKIRVYCRLRPLSEKEIAEKETQALAVVDEFSVEHMWKEDKPKQYVYDRVFDGGASQESVFDDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRDNSKYAFSLKAYMVELYQDTLIDLLLPKNAKHSKLEIKKDSTGMVAVENVTVRPISKIEDLNNIIQRGSDRRHTSGTQMNEESSRSHLILSVVIESTNLQSQAVARGKLSFVDLAGSERVKKSGSVGSQLKEAQSINKSLSALGDVISALSNGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVASNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRTEEEELEEIQEERPIKDRTSW 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00895 1269 CDD KISc_C_terminal 895 1220 - -
Adu01g00895 1269 ProSiteProfiles MyTH4 domain profile. 114 273 IPR000857 GO:0005856
Adu01g00895 1269 Gene3D - 277 390 - -
Adu01g00895 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1247 IPR027417 -
Adu01g00895 1269 MobiDBLite consensus disorder prediction 1 28 - -
Adu01g00895 1269 ProSitePatterns Kinesin motor domain signature. 1118 1129 IPR019821 GO:0003777|GO:0005524|GO:0007018
Adu01g00895 1269 Gene3D - 505 612 IPR011993 -
Adu01g00895 1269 SMART MyTH4_1 114 273 IPR000857 GO:0005856
Adu01g00895 1269 SUPERFAMILY PH domain-like 507 595 - -
Adu01g00895 1269 SUPERFAMILY Second domain of FERM 385 502 IPR035963 -
Adu01g00895 1269 Pfam FERM central domain 393 507 IPR019748 -
Adu01g00895 1269 Coils Coil 740 865 - -
Adu01g00895 1269 PRINTS Kinesin heavy chain signature 969 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 PRINTS Kinesin heavy chain signature 1119 1137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 PRINTS Kinesin heavy chain signature 1168 1189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 PRINTS Kinesin heavy chain signature 1088 1105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 Gene3D - 399 500 IPR014352 -
Adu01g00895 1269 ProSiteProfiles Kinesin motor domain profile. 897 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 SMART B41_5 274 507 IPR019749 -
Adu01g00895 1269 Gene3D - 1221 1268 - -
Adu01g00895 1269 CDD FERM_C_KCBP 504 610 - -
Adu01g00895 1269 SMART kinesin_4 895 1226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 618 1265 - -
Adu01g00895 1269 Pfam Kinesin motor domain 903 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Adu01g00895 1269 Gene3D Kinesin motor domain 884 1220 IPR036961 -
Adu01g00895 1269 SUPERFAMILY Prismane protein-like 840 901 IPR011254 GO:0003824|GO:0016491
Adu01g00895 1269 ProSiteProfiles FERM domain profile. 278 601 IPR000299 GO:0005856
Adu01g00895 1269 MobiDBLite consensus disorder prediction 35 49 - -
Adu01g00895 1269 Gene3D MyTH4 domain 93 274 IPR038185 -
Adu01g00895 1269 PANTHER KINESIN-RELATED 618 1265 IPR027640 GO:0003777|GO:0007018
Adu01g00895 1269 Coils Coil 625 694 - -
Adu01g00895 1269 Pfam MyTH4 domain 167 271 IPR000857 GO:0005856
Adu01g00895 1269 MobiDBLite consensus disorder prediction 1 49 - -
Adu01g00895 1269 Coils Coil 702 722 - -
Adu01g00895 1269 MobiDBLite consensus disorder prediction 1246 1269 - -
Adu01g00895 1269 CDD FERM_B-lobe 402 500 IPR019748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00895 Adu-Chr1 11954594 11961384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00895 29 1265 Calmodulin-binding Proteins AT5G65930 73.419 0.0 1857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00895 - - adu:107475586 2343.15