Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00887 ATGCACTTGGTGTTGCGCCACACCATGACGCTTCCTACTGATTCGGAACCACCACCACCTTCTCCTCCTCCACCGGATTCCGCCACCGACACCGCCACCGCAACCGCCGCAGCAAACGGAGCAACCACCACCACCACCACCTCCTCCTCATCATCCGAAAATCCACCGGATTCCCTGCCTACACCGCCGCAAGAGCTCCAACTCCCAATTTCATGGCCGCAAGACGGAACCTTGAGCCTCGAATGGATCCACAATCTGATGCAGTGCTTCGATTGGTCTTCGAGGAACTTTCCTCCTTCCGAGTTCCCTTCCGTTCTTCCCGTTCAGGTATTCGACTCTCTCATCCTCGTTGCTTCCAAGATGCTCCATAAGGAACCCAATTGCGTCACCGTTGATCCGTTTCGCCCTAATTCCGGCACGACGGCGTCGGTGGTGGTCGTTGGTGACGTTCACGGGCAGCTGCATGATCTGCTTTTTCTCCTCAAAGACGCAGGTTACCCTTCCGATGATCGAATCTTCGTCTTCAATGGTGATTACGTTGATCGTGGAGCTTGGGGGCTCGAAACTTTCGTGCTCTTGTTAGCTTGGAAGGTGTTTATGCCTCATAATGTATATCTGCTACGTGGGAATCACGAATCAAAATACTGCACATCGGTCTATGGTTATGAGAAGGAAGTGATGGCAAAGTATGGTGATAAAGGTAAGCATGTGTATCGCAAATGCTTGGGATGCTTTGAGGGTCTTCCTTTGGCTTCCATTGTAGCAGGGTGTGTATTCACAGCTCATGGAGGACTCTTCCGCAGTGTAACAGTGACGCCATCAAAGAGATTAAAAGGGAAGAAGAACAGAAAGATTCTTCTTAATCATGATAACAAAACTCTAACTCTTGGTTCCTTGGAAGAATTGTCTAAGGCCCGACGGTCAGTTCTTGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCGAAAAATCCTGGTCTTGCCCCGAACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTATCAATTAAAGCTGGTCATCAGGTCTCATGAAGGTCCTGATGCTAGGGAAAAGAGGGATGGTTTAGATAGAATGTCTGAAGGTTACACTATTGATCATGTTGTGGATTCTGGGAAACTGATCACCCTCTTTAGTGCTCCAGATTACCCGCAATTTCAGGCAACAGAGGAGAGGTATAACAACAAAGGAGCCTATGTTGTTCTTGAACCCCCAAATTTTGACAATGCCATATTTCATGGATTTACAGCAGTTACTCCAAGGCCAAAGGTGAATGCCTATTATAATTTTGAAGAGGTGATAGATTCTGACGAAGAGTTGGACTTGGAGTCTATGGTGACTTCTTGA 1419 0.4771 MHLVLRHTMTLPTDSEPPPPSPPPPDSATDTATATAAANGATTTTTTSSSSSENPPDSLPTPPQELQLPISWPQDGTLSLEWIHNLMQCFDWSSRNFPPSEFPSVLPVQVFDSLILVASKMLHKEPNCVTVDPFRPNSGTTASVVVVGDVHGQLHDLLFLLKDAGYPSDDRIFVFNGDYVDRGAWGLETFVLLLAWKVFMPHNVYLLRGNHESKYCTSVYGYEKEVMAKYGDKGKHVYRKCLGCFEGLPLASIVAGCVFTAHGGLFRSVTVTPSKRLKGKKNRKILLNHDNKTLTLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLVIRSHEGPDAREKRDGLDRMSEGYTIDHVVDSGKLITLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNAIFHGFTAVTPRPKVNAYYNFEEVIDSDEELDLESMVTS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00887 472 Coils Coil 470 472 - -
Adu01g00887 472 SMART pp2a_7 106 446 IPR006186 GO:0016787
Adu01g00887 472 MobiDBLite consensus disorder prediction 13 27 - -
Adu01g00887 472 ProSitePatterns Serine/threonine specific protein phosphatases signature. 207 212 IPR006186 GO:0016787
Adu01g00887 472 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 42 469 - -
Adu01g00887 472 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 42 469 - -
Adu01g00887 472 MobiDBLite consensus disorder prediction 28 55 - -
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 143 170 IPR006186 GO:0016787
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 173 200 IPR006186 GO:0016787
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 206 230 IPR006186 GO:0016787
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 243 269 IPR006186 GO:0016787
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 303 330 IPR006186 GO:0016787
Adu01g00887 472 PRINTS Serine/threonine phosphatase family signature 397 413 IPR006186 GO:0016787
Adu01g00887 472 Pfam Calcineurin-like phosphoesterase 143 371 IPR004843 GO:0016787
Adu01g00887 472 SUPERFAMILY Metallo-dependent phosphatases 103 442 IPR029052 -
Adu01g00887 472 Gene3D - 101 465 IPR029052 -
Adu01g00887 472 CDD MPP_PP7 72 453 IPR041754 -
Adu01g00887 472 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00887 Adu-Chr1 11712687 11716043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00887 69 363 Calmodulin-binding Proteins AT5G63870 69.932 1.74e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00887 K04460 - gmx:100810695 775.007