Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00879 ATGATGCCTCCTGAAATTATTGATCTTACAGAAGGAGAAGCATCTCCTCCACCACCATCAAGATTTTCAGATGGACCAACAATTCTTAACTTTGCTGTGGTCGATCCGGTCCTGTCCGATTTTCAGAACCATGCTACTACTACTAGTGTGTGGCCATCTTCAATGCATATCTATGATCCTTCTGCTAATCCTTCTCATTATCATCATTATCAGGGTTCTAATAATAATAGTAGCAGCTTCTTCTTCCAACCCTACATGCATGCTCATCATCATCATCATCATCATCAACCCGATTGCCTCACTGCTAATTGGACTCTCAGAGACCATGAGTTATTTCTGATGGGACTAAGCAATTATGGAAGAGGACGTTGGAGTAAAATAGCTAGACACTATCTTCATAACAAGACACCACAACAAGTTCAGAGCTATGCTAATAGATTCTTTAGCCACCAATCACCATCACCACCACCATCATCAACAACACAACACTTCTACAACTTTAGAATAAGAAACCCATCCTCATCATCAACATACCCTTCTTCCGGAGATGAACCAATTAAGAAAACGCTCATGCTTTTTCCCGAGAAGAAAGAGCATAATGAAATGTTTGCTACTAGAGAAACCGCCGCTACTACTACTACCAATACCGCCGCTAATAACTATGAATATGGATTCTTGTTTGGAATAATCCCAACAACAACTACTATTGGTGCAAGCTCTTCTTCTTTCATGAGTGGTAGTGGAAACTATTATGAAGAAATTGATTTGGAGTTGCGTTTGGGTAGTAGTTGA 792 0.4003 MMPPEIIDLTEGEASPPPPSRFSDGPTILNFAVVDPVLSDFQNHATTTSVWPSSMHIYDPSANPSHYHHYQGSNNNSSSFFFQPYMHAHHHHHHHQPDCLTANWTLRDHELFLMGLSNYGRGRWSKIARHYLHNKTPQQVQSYANRFFSHQSPSPPPSSTTQHFYNFRIRNPSSSSTYPSSGDEPIKKTLMLFPEKKEHNEMFATRETAATTTTNTAANNYEYGFLFGIIPTTTTIGASSSSFMSGSGNYYEEIDLELRLGSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00879 263 SMART sant 100 150 IPR001005 -
Adu01g00879 263 Pfam Myb-like DNA-binding domain 103 145 IPR001005 -
Adu01g00879 263 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Adu01g00879 263 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 44 261 - -
Adu01g00879 263 SUPERFAMILY Homeodomain-like 103 151 IPR009057 -
Adu01g00879 263 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 44 261 - -
Adu01g00879 263 ProSiteProfiles SANT domain profile. 103 152 IPR017884 -
Adu01g00879 263 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g00879 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Adu01g00879 263 CDD SANT 103 148 IPR001005 -
Adu01g00879 263 Gene3D - 102 152 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g00879 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00879 - - adu:107478694 492.271