Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00873 ATGGGTTTTTGGGAACTATTGGCGGTGGCATGTAATCCAATTATTCAAGTCCTACTTGTGAGTGCAGTGGGAGTTTATATGGCATCTGATAAATTTGATAATTTTCTCTCAGAAAATTTTCGAAGATCCTTGAACAAGCTTGTGTTCATTGCATTCACTCCATCACTTATATTTGCAAGTTTTGCAAGGAGTGTTTCTCTTGATGATATGATATCATGGTGGTTTATGCCGGTTAACATTGGATGTACCTTTGTAATTGGAGGGTTTCTTGGGTGGTTAATTGTAAAATTACTAAAGCCAAGCTTGAAAGTTGAAGGCCTTATTATTGCTGCTTGTTCAACAGGCAATATGGGTAATCTTCCAGTTGTAATAATCCCAGCAATATGTTATGAAAAAGGAGGTCCATTTGGTGAAAGAGAAAAATGCAGAGTCAGAGCACTTGCATATGCTTCCTTCTCCTTGGCGGTTGGTGGCATATTCATTTGGACCTTTACTTACCAATTAGTAAGAGACAGAGCCATGAAATATAAGGCATGGGAAGCTGCTCAAATCTTGAAGATTCCCAACAAAAACTATGATGATGCTAACACACAAACAAGCCTTCTCAAAGGGAATCAAAATCAAAACACAAACAGAGACACTGAGAACCAAATTATTCTAGATCAAGTTCCACAATCGTGTTGGCAAGGATTGGTTGAAACTGTGAGCCAAATAGTCTCAGAACTATTGTCACCCCCAACAGTTGCTACATTTTTAGGTTTCATCTTTGGTGGGGTTGACTGGCTCAGGAGCCTAATAATTGGAGAAGATGCTCCATTGAGAGTGATCCAAGAGACCATTCAGTTGCTAGGGGAAGGGACAATTCCTTGCATCACCATTTTGCTTGGTGGCAACCTCACTCAAGGCATGAAATCATCCACTATAGAACCACTGACACTGATTAGTGTGGTCTTAGTTAGACTTTTCTTATTACCTTCAATTGGACTTTACATTGTGAGAGGAGCTGCAAGTTTAGGGTTTCTTCCATTAGATCCTTTGTTTCAGTATGTCCTTGTCATGCAGTATGCCATGCCACCTGCAATGAATATTTGTACCATGACTCAGCTATTTGATGCAGGCACTGAGGAGGCCTCAGTTATTACCTTGTGGACATATTGTGCTGCAACTATATCCCTCACACTCTGGTCAACCACCCTTTTATATGTATTAACTTAA 1215 0.3992 MGFWELLAVACNPIIQVLLVSAVGVYMASDKFDNFLSENFRRSLNKLVFIAFTPSLIFASFARSVSLDDMISWWFMPVNIGCTFVIGGFLGWLIVKLLKPSLKVEGLIIAACSTGNMGNLPVVIIPAICYEKGGPFGEREKCRVRALAYASFSLAVGGIFIWTFTYQLVRDRAMKYKAWEAAQILKIPNKNYDDANTQTSLLKGNQNQNTNRDTENQIILDQVPQSCWQGLVETVSQIVSELLSPPTVATFLGFIFGGVDWLRSLIIGEDAPLRVIQETIQLLGEGTIPCITILLGGNLTQGMKSSTIEPLTLISVVLVRLFLLPSIGLYIVRGAASLGFLPLDPLFQYVLVMQYAMPPAMNICTMTQLFDAGTEEASVITLWTYCAATISLTLWSTTLLYVLT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00873 404 Pfam Membrane transport protein 12 395 IPR004776 GO:0016021|GO:0055085
Adu01g00873 404 PANTHER - 1 403 IPR045033 GO:0080162
Adu01g00873 404 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00873 Adu-Chr1 11576350 11581560 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00873 K24139 - gmx:100787850 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00319 05 3410887 3419923 Adu01g00873 01 11576350 11581560 PCT