Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00871 ATGAAACCTCTTTATCGTCAAATTCTTATCGTTCTCTCTGTTCTCTGTGCTGTCGTTTTGCAATTCTTCGTGACTCTCTTCAGCTCCAATGATGTATCATCACAGCCACTGCCACCGATCTCACGAATCCCTCTTCTCAAACTCCATCATCATCTACCTCAACAGCAGCAACAACTCAAGGCTCTCCCTTCACCATCATCTTCACGATCCCTTCTCTCTCTTTCTCCCAAGCCAACTACAGCACTGGTTGCTGCTTTAGATGGGACTATGTATTTGGTGGACAAACAGGAGAATGGCCCCACAAGAGTGATATGGTCGTTCTCAACTGGATCTCCAATCTACCATTCATATCAAGCTCCTATTCACAAGGATAGCGGTAAAGAAAACAGATCTACAGCAAGAATCAGCGGGTCTGTGGAATGCGGGGATGACTGGTCACTGTACATGCATGATAAACACTTTGGTAAAATGAAAATCTCAGAATCAATTGCAGAATATGTTGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTTACACTTGGATCCAAGAGAAGCACTTTGTTTGAAGTTGATGCTAAAACCGGAAGGATCGTTCAAATCCATAGTATGTCTGATTCTGATAATTCTTCTACATCTTGGAGTGATGACAAGAAGAGTGATACAGATATCCTTATAACAAAGAAAAAGGATCTTGCTAATCCTACGGAGCTGAATTCGCCGGAGTTGCTACTCAAGATATTTAGGACAGATTATTCTCTTCGATCTGTTGGTCCTAGTTCAGGAGTAGTTTTGTGGACTATGACTGTATCCGAATTCGAGGCTGTATTATTATGCCAACATACTTCATTTGATGCCGATGATGAGTATGTTTCTGTCGGTGAGCTTGGTTTTGCGATGCCATATCCATGTCAAGAGATCCAACCAGTCTTTCGCTTGCGTAAGAATTTTATACTAGAACCCTCAATCACTGAAAGGTTACCTGGTTCTGATCATGAAAACAATATGCTTTTGATGCCTGCGTCGGATTTGATGCTTCCTTCACAAGCAAATTTTGAAAAATTAAATATCGATGATGGTAATATGATGCTTCCTTTGCCAATACCAAATTCTTTGCCTTCCCCGAAACCAAAAATTGTCTATCCAAGCCGAATGCATGAATGGTCAACACCATTACGTTTTATGATGCTTATGGTTTTGGGCTTTGTCCTCTATACTCTAGTGGTTAAAAGTAAAGATACGCCAAAGGATCAAAACCAGTCTGAATCGAAAATTTTGCCTGCTAAGAAAAAGAAGACACGAAAGTCAGCAAAGAACAATGTAGCAGTTGACAAAAAGGAAAAACATCTGTCCTCCGAAGATGAGGATGTGCTGATGCGAAAGGATCTCGACATAGAAGCAGGCAGGTGGATGCAATTTAACCAAATTGACCAAGGTGTTGACGGACGCAGGGTTGGTAAACTGCTTGTGTCAAATAAAGAAATTGCTAAGGGAAGCAATGGCACCATTGTCTTTGAGGGAATATATGAAGGTCGGGCAGTTGCTGTCAAGCGTTTGGTCAAGACTCATCATGATGTAGCATACAAAGAAATCCAAAATCTGATTGTATCTGATCATCACCCAAACATTGTTCGATGGCATGGGGTAGAATATGATCAAGATTTTGTTTACCTTGCTCTGGAACGATGTACATGCAGCTTGGATGATTTTATTCAAATTTATTCGGATATATCAGATAACCCTCTGTTTAGGAAGAACCAAGCTTTCAAGTCTTCTATTGAGGCCCAAATTGATATGGGGAAGGATAATATGCATGGTCTGTGGAAAGCCAATGGCTATCCATCACCTCTATTACTGAAATTGATGAGAGATGTCGTTTCTGGGATTGTTCATTTGCATGAACTAGGAATAATACATCGTGATTTGAAACCCCAAAATGTTTTGATAATCAAGGAAAGATCCTTGTGCGCAAAGCTTTCTGATATGGGCATTAGCAAACGCCTCCCTGAAGATATGTCTGCTTTGGGTCATAATGCTACTGGAGCTGGCAGTTCAGGTTGGCAAGCACCAGAACAACTTGGTCAAGGACGCCAAACACGGGCCGTAGATTTATTTAGCTTAGGTTGTGTCCTCTTTTTCTGCATGACTGGGGGGAGGCATCCATTTGGAGAACGGCTTGAACGCGATGTTAATATTGTGAAAAACAGAATGGATCTTTTCTTAGTGGAGTTCATTCCTGAAGCAGAAGATCTAGTTTCTAGTTTATTGAACCCTAACCCTGATATAAGGCCAAAGGCAATTGAAGTATTGCACCATCCATTTTTTTGGAGTCCAGAAATGAGACTGTCATTTTTACGCGATGCCAGTGATAGAGTGGAACTAGAAGATAGGGAGACTAATTCTGTTCTTCTGAACGCATTAGAAAGCATTGCTACAGTCGCATTAGGTGCGAAATGGGACGAAAAGTTGGAACCAGCCTTTCTTACTAACATTGGTCGATATCGACGGTACAAGTATGATAGTGTTCGAGACTTGTTGCGCGTCATGAGGAACAAGCTAAATCATTATAGAGAGTTGCCTCAAGAAATCCAGGAACTTGTGGGAACTGTTCCGGAAGGATTCAATGAATACTTTGCAAGCCGATTCCCAAGGCTATTAATCGAAGTGTATAAAGTTATATCCAAGTATTGCAAAGAAGAACAATGTTTTGAGAGGTATTTCAAGAACCTTAATTAG 2736 0.4105 MKPLYRQILIVLSVLCAVVLQFFVTLFSSNDVSSQPLPPISRIPLLKLHHHLPQQQQQLKALPSPSSSRSLLSLSPKPTTALVAALDGTMYLVDKQENGPTRVIWSFSTGSPIYHSYQAPIHKDSGKENRSTARISGSVECGDDWSLYMHDKHFGKMKISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGRIVQIHSMSDSDNSSTSWSDDKKSDTDILITKKKDLANPTELNSPELLLKIFRTDYSLRSVGPSSGVVLWTMTVSEFEAVLLCQHTSFDADDEYVSVGELGFAMPYPCQEIQPVFRLRKNFILEPSITERLPGSDHENNMLLMPASDLMLPSQANFEKLNIDDGNMMLPLPIPNSLPSPKPKIVYPSRMHEWSTPLRFMMLMVLGFVLYTLVVKSKDTPKDQNQSESKILPAKKKKTRKSAKNNVAVDKKEKHLSSEDEDVLMRKDLDIEAGRWMQFNQIDQGVDGRRVGKLLVSNKEIAKGSNGTIVFEGIYEGRAVAVKRLVKTHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDQDFVYLALERCTCSLDDFIQIYSDISDNPLFRKNQAFKSSIEAQIDMGKDNMHGLWKANGYPSPLLLKLMRDVVSGIVHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKRLPEDMSALGHNATGAGSSGWQAPEQLGQGRQTRAVDLFSLGCVLFFCMTGGRHPFGERLERDVNIVKNRMDLFLVEFIPEAEDLVSSLLNPNPDIRPKAIEVLHHPFFWSPEMRLSFLRDASDRVELEDRETNSVLLNALESIATVALGAKWDEKLEPAFLTNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGTVPEGFNEYFASRFPRLLIEVYKVISKYCKEEQCFERYFKNLN 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00871 911 Pfam Ribonuclease 2-5A 781 907 IPR010513 GO:0004540|GO:0006397
Adu01g00871 911 Gene3D - 54 295 IPR015943 GO:0005515
Adu01g00871 911 CDD RNase_Ire1 779 907 - -
Adu01g00871 911 PANTHER IRE1-RELATED 49 907 IPR045133 GO:0004521|GO:0004674|GO:0030968
Adu01g00871 911 SUPERFAMILY Protein kinase-like (PK-like) 492 792 IPR011009 -
Adu01g00871 911 ProSiteProfiles KEN domain profile. 778 909 IPR010513 GO:0004540|GO:0006397
Adu01g00871 911 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 49 907 - -
Adu01g00871 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Adu01g00871 911 Gene3D Transferase(Phosphotransferase) domain 1 603 777 - -
Adu01g00871 911 MobiDBLite consensus disorder prediction 413 448 - -
Adu01g00871 911 SMART PGNneu 840 894 - -
Adu01g00871 911 Pfam Protein kinase domain 492 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00871 911 Gene3D KEN domain 779 911 IPR038357 -
Adu01g00871 911 SMART serkin_6 489 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00871 911 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 73 216 IPR011047 -
Adu01g00871 911 ProSiteProfiles Protein kinase domain profile. 489 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00871 911 Gene3D Phosphorylase Kinase; domain 1 477 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00871 Adu-Chr1 11560690 11565918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00871 469 774 MAP Kinase Kinase Kinase AT3G06030 24.516 7.82e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Adu01g00871 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00871 K08852 - gmx:100788389 1197.96