Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00863 ATGATCAAAGTTTGGGTTCTTGTCATTGTGATGTTCTATAATGGTTTTCCATCAAAAGGGACAAGCAATAGTAATAATGTTACAAGGCCAAGTACAGTTAATGTTGGAGCAATTTTATCTTTTAATTCAACCATTGGAGGAGTGGCTAAAATTGCAATACAAGCAGCAGTAGATGATATAAATTCCAATGCAACCATTCTCAATGGAACTAAGTTTAATATCTCAATGCAGGACACAAAATTCTCCCCCGGATTTCTAGGAATTATTGACTCATTAATATTGATGGAGAAAGGCACTGTGGCAATAATTGGTCCACAGTACTCAGAAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTGTTGATCACTTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCATATAAAGTACCCTTTAGGCCTAATAATAATAACAACATTAGTGAAGAAGAAATAAACAATGCATTATTCAAGATAGCTTTGATGGAATCAAGGGTAATAGTTGTTCATATAGTAGCAGATTTAGGGTTAAAAGTTCTTAAGGTTGCTCAATCACTTAGCATGATGGGGAGTGGTTATGTGTGGATAGCCACTGATTGGCTTTCCACTGTGTTAGATTCAAACCCTTCATTGTCCACAAGTTCAGCCATGAATGACATCCAAGGTGTTATTACCTTGCGCATGTATACACCTGATTCAGAATTGAAGAGGAAATTTGTGTCTAGGTGGAATAACCTAACCCTAAAAATGAATCATCAAGAGGGTCCTTTTGGATTGAACACCTTTGGTTTATATGCTTATGACACTGTTTGGGTCATAGCTTATGCTCTTGATGCTTTGTTTTCTGGGGGAAATAATAATAATAATAATAATAACAACAATCATAATATTTTATTCTCAAATGATTCAAGTCTAAACTTGTTAAGGGGTGACTCACTTCATCTTGATACTATGGGGGTGTTTATAAATGGTAGCACATTGCTTCAGAAGATTCTAGAAGTTAATCAAACCGGTTTAACCGGGCGGATGATGTTTGATTTAGATGGAAACTTGTTGAACCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATATTGGTCAGAATCATATGGTCTTCACACTGGTGAAGAAGTTCCAAATGATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCTAGCAATGGAAGACATTTGAGAATTGGAGTGCCACTTAGGGTTAGCTACCATGAGTTTGTGTCAAGAATTGAAGGCACTGACATGTTTGGTGGTTATTGCATTGATGTGTTTTTTGCAGCACTAAACTTGTTGCCTTATCCAGTTCCATACAAATTTGTTTCTTTTGGTAATGGGAGAACCAATCCCTTGAATTCAGAACTTCTCCATCAGATCACAATTGGTGCCTTTGATGCCGTTATTGGGGATATTACTATTACTACAAACAGAAGTAAGATAGTGGATTTCACTCAGCCATATATAGAGTCAGGGTTAGTGGTTGTGGCACCTATCAAGGAATTGAAATCAAGTGCTTGGGCCTTTCTTATACCATTTACTCCAATGATGTGGTTTGTCACAGGAATGCTTTTTCTAATTGTTGGAGTTGTTGTGTGGATTTTAGAGCGGCCCTTTAATGATGACTTTAGAGGACCAATTAGAAGACAATTAGTCACTATTATTTGGTTTAGCTTTTCAACTCTAGTTTTCGCACATAAAGAGAAAACCGTTAGCACCCTTGGTCGCTTAGTCCTAATCATATGGTTGTTTGTGGTTCTAATACTAAGCTCTAGCTACACTGCAAGCCTAACATCAATTCTCACAGTGGAAAAACTCTCTTCCCCAGTGAAAGGAATTAAAAGCTTAGTGGTCAACAATGACCGAATTGGTATCATGAGTGGCACATATGCTGAAAATTATCTTAGTGAGGTGTTTAACATACATAGATCAAGGCTTGTTCCTTTCAATTCTCTATCTGAATTTGAGAAGGCTTTGAAGGATGGACAAGACAATGGTGGTGTTGCTGCTATCATAGCTGAGCGTGCATACATGGAGTTGTTCCTATCAACTAGATGTCAATTTGGTATTGTTGGCCAAGAATTCACCAAAATGGGATGGGGCTTTGCCTTTCCAAGGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTGATTGCCCTCCTTTGCTATCTTATTAGAATGACCTACCGTTTTAGGAGGCACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCGTCATGGTTGTTCGGGAAGGAGATGATTCTGTTTAACATGAGGGTGCACCATGGGGGTGCATTCGGATATGAGAACGGTGTGCTCAAGTACTTGAAGGGTCAAGCTACAGTCGTGGAAGACATTGACGGCGATCGGTGGAGTGTGTTTGAGGCATACGAGGAGCTGAATCGGTTATCTGGACGTGGGGGAGAAACTGGAGGCGTCGACAGTGAGGAACCTATAGGTGGTGGTCTGGAGGTAGTGGTGTTTGAAGGGAACGAACAAAAGACTGGTGGAGTTGGGGTTGTGGCTGAAGTCGAATGCCAGAATAAGGACGGTGGAATGGAATTAGGCCAAGAGGGACAGGGGGATAGTGACCATGATAATAGTGGTGACAGTGATGACCCAACATACTTGCCATCTAATAAAGAGGAAAATAGTGTCGAAGACATCCACTTCACTGACAGTGAGGAGGGCAAAAGGGTTGTGACAAGTGATTTGGATGATGAGGAAGCAGTCGACAGTGATGAATTAGAGCAGGACCATATCATTGGAGGAAAAAAGTCGGGGGCTGATGATGCAAAGGAGGCTGCCGAGACTGAGGGGCAGAGACACATCATGTTGGAATTATGCATAGCAAGTGGTTGGGTACCCAGTTTAAATGCTGTCCTAGTAGAGGAAAGAGAGAAACCTATTATGACCATGTTAGAGGATATTAGGGTGTATATGATGACTAGATGGGCTGCAAATAGGGAAAGGGTTCTGAATTATCAAGGAAACATTATGCCAATGATTAGGAAAAAATTAGAGAAATGGGCAAGCTTAGCTAGGGACTGGAGGTCATACTGGTCAGCTACTAGTAAGTACGAAGTTATGTATGGTCTAGATAAATACATTGTGGATTTGGCTGCTGGTGACTGTTCTTGCAGGAAATGGCAAATGAGTGGGATTCCTTGTCCTCATGCCATCAGCTGTATCACCTTCAAGGGCCTTGATTTGGAATCCTATGTGGACGATTGCTACAAGAAAGAAGCCTACCTAAGGTGCTATTGGGAGGTCATACATCCTGTTAAAGGCCCGGACCTATGGGAGAGGACTCAATATGATGATGTCATCCCACCTCCATACAGGAGGCCAAGCCACAGACCTGTGAAGAAGAGGAAGCGAGGGTCTGTAGATGAAGACAACAGAAGCCAGACTCATCTGTCACGGAGGGATCAAGTCCAAAGGTGCTCCAACTGTGGTGCAATGGGACACAAGAAGAATGGCTGCACCAAACTTAAGAAGAGGGCCCAATCTTCAACCAAAAGAGGGAAGAGGGATACACCTAAGCTGGCACCTGGTCAAACAGTTTGGGGAGGGAGAAAGAGGAAGACTACACCATCACCAACCAACCTGCTAGCAGCTCAGCCCAGAAAATCAAACCTAAGGCCCAAGAAAAGTGCAGGCCGGCCCACCACACCAACACCTCAGCCCAAGAAAGCTTTCACTCAGCCCAATATCCAAGTCCACCACAAGAACAAGGCTGCAGCTGCTGCAACCTCTACCAGCAACAAACAACCCCTGAGCCAGCTATCTGAGAGGAAGAGACATTTTTTCTGTCATTCAAAGCAGTGCACCTCATGTCCCTCTGCAGAAGCTGAAGTTGATGGCCAAATTACCTCCATCTCAGACACTGTTGTTGAGTGTTGCTTCTCTGTGCTTCGTTACACTGTCAGGACATCCACTATATTTTGGTATTAG 4383 0.4205 MIKVWVLVIVMFYNGFPSKGTSNSNNVTRPSTVNVGAILSFNSTIGGVAKIAIQAAVDDINSNATILNGTKFNISMQDTKFSPGFLGIIDSLILMEKGTVAIIGPQYSEMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIVDHFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNNNNISEEEINNALFKIALMESRVIVVHIVADLGLKVLKVAQSLSMMGSGYVWIATDWLSTVLDSNPSLSTSSAMNDIQGVITLRMYTPDSELKRKFVSRWNNLTLKMNHQEGPFGLNTFGLYAYDTVWVIAYALDALFSGGNNNNNNNNNNHNILFSNDSSLNLLRGDSLHLDTMGVFINGSTLLQKILEVNQTGLTGRMMFDLDGNLLNPSYEIINVIGTGVRRIGYWSESYGLHTGEEVPNDGNSSEGLYGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRVSYHEFVSRIEGTDMFGGYCIDVFFAALNLLPYPVPYKFVSFGNGRTNPLNSELLHQITIGAFDAVIGDITITTNRSKIVDFTQPYIESGLVVVAPIKELKSSAWAFLIPFTPMMWFVTGMLFLIVGVVVWILERPFNDDFRGPIRRQLVTIIWFSFSTLVFAHKEKTVSTLGRLVLIIWLFVVLILSSSYTASLTSILTVEKLSSPVKGIKSLVVNNDRIGIMSGTYAENYLSEVFNIHRSRLVPFNSLSEFEKALKDGQDNGGVAAIIAERAYMELFLSTRCQFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLETKSFWGLFLLIGIACLIALLCYLIRMTYRFRRHYSNSTNLEVPSSSSWLFGKEMILFNMRVHHGGAFGYENGVLKYLKGQATVVEDIDGDRWSVFEAYEELNRLSGRGGETGGVDSEEPIGGGLEVVVFEGNEQKTGGVGVVAEVECQNKDGGMELGQEGQGDSDHDNSGDSDDPTYLPSNKEENSVEDIHFTDSEEGKRVVTSDLDDEEAVDSDELEQDHIIGGKKSGADDAKEAAETEGQRHIMLELCIASGWVPSLNAVLVEEREKPIMTMLEDIRVYMMTRWAANRERVLNYQGNIMPMIRKKLEKWASLARDWRSYWSATSKYEVMYGLDKYIVDLAAGDCSCRKWQMSGIPCPHAISCITFKGLDLESYVDDCYKKEAYLRCYWEVIHPVKGPDLWERTQYDDVIPPPYRRPSHRPVKKRKRGSVDEDNRSQTHLSRRDQVQRCSNCGAMGHKKNGCTKLKKRAQSSTKRGKRDTPKLAPGQTVWGGRKRKTTPSPTNLLAAQPRKSNLRPKKSAGRPTTPTPQPKKAFTQPNIQVHHKNKAAAAATSTSNKQPLSQLSERKRHFFCHSKQCTSCPSAEAEVDGQITSISDTVVECCFSVLRYTVRTSTIFWY 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1335 1351 - -
Adu01g00863 1460 ProSiteProfiles Zinc finger SWIM-type profile. 1169 1210 IPR007527 GO:0008270
Adu01g00863 1460 MobiDBLite consensus disorder prediction 993 1080 - -
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1025 1048 - -
Adu01g00863 1460 SUPERFAMILY Periplasmic binding protein-like I 29 474 IPR028082 -
Adu01g00863 1460 Gene3D - 51 417 - -
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1058 1080 - -
Adu01g00863 1460 Pfam Receptor family ligand binding region 51 427 IPR001828 -
Adu01g00863 1460 SUPERFAMILY Periplasmic binding protein-like II 459 825 - -
Adu01g00863 1460 Gene3D - 595 731 - -
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1360 1377 - -
Adu01g00863 1460 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 891 - -
Adu01g00863 1460 PANTHER GLUTAMATE RECEPTOR 12 891 - -
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1250 1377 - -
Adu01g00863 1460 CDD GluR_Plant 483 823 - -
Adu01g00863 1460 MobiDBLite consensus disorder prediction 1267 1284 - -
Adu01g00863 1460 Pfam Bacterial extracellular solute-binding proteins, family 3 543 824 IPR001638 -
Adu01g00863 1460 Gene3D - 477 594 - -
Adu01g00863 1460 Gene3D - 149 442 - -
Adu01g00863 1460 SMART 26again6 1185 1212 IPR006564 GO:0008270
Adu01g00863 1460 SMART GluR_14 482 825 IPR001320 GO:0015276|GO:0016020
Adu01g00863 1460 CDD PBP1_GABAb_receptor_plant 34 442 IPR044440 -
Adu01g00863 1460 Pfam Ligand-gated ion channel 825 856 IPR001320 GO:0015276|GO:0016020
Adu01g00863 1460 Gene3D - 750 830 - -
Adu01g00863 1460 Pfam SWIM zinc finger 1169 1203 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00863 Adu-Chr1 11528662 11538281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00863 1 880 Ion Channels AT1G42540 56.468 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00863 K05387 - gmx:100789442 1382.85