Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00861 ATGATCAAAATATGGCTCCTTGTCCTTGTGATCTTTTGCAATGGCTTCACTTCAAAAGGAACAATTAGCAATAATAATGTTCCCACAAGACCAATAACTATTAATATTGGGGCAATTTTATCTTTCAATTCAACCATTGGAAGAGTGGCTAAAGTTGCCATACAAGCAGCAGTGGATGATATAAATTCCAATGCAACCATTCTCAATGGCACTAAACTTAATATCTCAATGCAGGACACAAAATTCTCTAGTGGATTTCTAGGAATTATTGATTCATTAATATTGATGGAGAAAGGCACTGTGGCAATAATTGGTCCACAGTACTCAGAAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTGTTGATCACTTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCATATAAAGTACCCTTTAGGCCTAATAATAATAACAACATTAGTGAAGAAGAAATAAACAATGCATTATTCAAGATAGCTTTGATGGAATCAAGGGTAATAGTTGTTCATATAGTAGCAGATTTAGGGTTAAAAGTTCTTAAGGTTGCTCAATCACTTAGCATGATGGGGAGTGGTTATGTGTGGATAGCCACTGATTGGCTTTCCACTGTGTTAGATTCAAACCCTTCATTGTCCACAAGTTCAGCCATGAATGACATCCAAGGTGTTATTACCTTGCGCATGTATACACCTGATTCAGAATTGAAGAGGAAATTTGTGTCTAGGTGGAATAACCTAACCCTAAAAATGAATCATCAAGAGGGTCCTTTTGGATTGAACACCTTTGGTTTATATGCTTATGACACTGTTTGGGTCATAGCTTATGCTCTTGATGCTTTGTTTTCTGGGGGAAATAATAATAATAATAATAATAACAACAATCATAATATTTTATTCTCAAATGATTCAAGTCTAAACTTGTTAAGGGGTGACTCACTTCATCTTGATACTATGGGGGTGTTTATAAATGGTAGCACATTGCTTCAGAAGATTCTAGAAGTTAATCAAACCGGTTTAACCGGGCGGATGATGTTTGATTTAGATGGAAACTTGTTGAACCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATATTGGTCAGAATCATATGGTCTTCACACTGGTGAAGAAGTTCCAAATGATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCTAGCAATGGAAGACATTTGAGAATTGGAGTGCCACTTAGGGTTAGCTACCATGAGTTTGTGTCAAGAATTGAAGGCACTGACATGTTTGGTGGTTATTGCATTGATGTGTTTTTTGCAGCACTAAACTTGTTGCCTTATCCAGTTCCATACAAATTTGTTTCTTTTGGTAATGGGAGAACCAATCCCTTGAATTCAGAACTTCTCCATCAGATCACAATTGGTGTGTTTGATGCTGTGGTTGGGGACATTACTATTACTACAAACAGAACAAAGGTAGTGGATTTCACTCAACCATATATTGAATCAGGACTAGTTGTTGTGGCACCTATCAAGAAAATGAAATCAAGTGCATGGGCCTTCCTCACACCATTTACTCCAATGATGTGGTTTGTCACAGCAACCTTTTTCTTAGTTGTTGGAGTTGTTATCTGGATTTTAGAGCGCCGTGTCAATGATGATTTTAGAGGACCTCCTAGAAGACAGTTAGTCACTATTATTTGGTTTAGCTTTTCAACTTTATTTTTTGCACATAGAGAAAAAACTGTTAGCACTCTTGGTCGCATAGTCCTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATTCTCACAGTGGAACAACTCTCTTCCCCAGTGAAAGGGATTGAAAGCTTAGTGATAAGCAATGACCGAATTGGTTTCTTAAGAGGTTCATTTGCTGAGAATTATCTTAGTGATGAACTTAACATACATAGGTCAAGGCTTGTTCCTCTGAATGACCCTTCAGAATATGAGAAGGCATTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGAGCATACATGGAGCTGTTCTTAGCAACTAGATGTGAATTTGGGATTGTTGGTCAAGAGTTTACTAAGATGGGATGGGGCTTTGGCTTTCCAAAGGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAAAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAGCAAGGCATAGATAGGCTTGAGATTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGTTTCATTGCTCTCTTTTGCTATCTTACTAGAATGACCTACCGTTTTAGGAGGCACTACTCCAATAGTACCAACCTTGAAGTCCCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATGCTCTTCTTGTCTTAAATCATTCTTTTCATTTGTCAATGAGAGAGAAGATTATTACTGCCCAAAGTAA 2769 0.3803 MIKIWLLVLVIFCNGFTSKGTISNNNVPTRPITINIGAILSFNSTIGRVAKVAIQAAVDDINSNATILNGTKLNISMQDTKFSSGFLGIIDSLILMEKGTVAIIGPQYSEMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIVDHFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISYKVPFRPNNNNNISEEEINNALFKIALMESRVIVVHIVADLGLKVLKVAQSLSMMGSGYVWIATDWLSTVLDSNPSLSTSSAMNDIQGVITLRMYTPDSELKRKFVSRWNNLTLKMNHQEGPFGLNTFGLYAYDTVWVIAYALDALFSGGNNNNNNNNNNHNILFSNDSSLNLLRGDSLHLDTMGVFINGSTLLQKILEVNQTGLTGRMMFDLDGNLLNPSYEIINVIGTGVRRIGYWSESYGLHTGEEVPNDGNSSEGLYGVIWPGQTTQTPRGWVFASNGRHLRIGVPLRVSYHEFVSRIEGTDMFGGYCIDVFFAALNLLPYPVPYKFVSFGNGRTNPLNSELLHQITIGVFDAVVGDITITTNRTKVVDFTQPYIESGLVVVAPIKKMKSSAWAFLTPFTPMMWFVTATFFLVVGVVIWILERRVNDDFRGPPRRQLVTIIWFSFSTLFFAHREKTVSTLGRIVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGFLRGSFAENYLSDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFGFPKDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLEIKSFWGLFLLIGIACFIALFCYLTRMTYRFRRHYSNSTNLEVPSSSSSSSSSSSSSSSCSSCLKSFFSFVNEREDYYCPK 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00861 922 Pfam Bacterial extracellular solute-binding proteins, family 3 544 825 IPR001638 -
Adu01g00861 922 Pfam Ligand-gated ion channel 826 857 IPR001320 GO:0015276|GO:0016020
Adu01g00861 922 SUPERFAMILY Periplasmic binding protein-like I 31 475 IPR028082 -
Adu01g00861 922 PIRSF IGluLR_plant 1 920 IPR017103 -
Adu01g00861 922 Gene3D - 150 443 - -
Adu01g00861 922 SUPERFAMILY Periplasmic binding protein-like II 460 826 - -
Adu01g00861 922 Gene3D - 595 722 - -
Adu01g00861 922 CDD GluR_Plant 484 824 - -
Adu01g00861 922 CDD PBP1_GABAb_receptor_plant 35 443 IPR044440 -
Adu01g00861 922 Gene3D - 475 594 - -
Adu01g00861 922 Gene3D - 723 828 - -
Adu01g00861 922 Pfam Receptor family ligand binding region 52 428 IPR001828 -
Adu01g00861 922 PANTHER GLUTAMATE RECEPTOR 13 886 - -
Adu01g00861 922 SMART GluR_14 483 826 IPR001320 GO:0015276|GO:0016020
Adu01g00861 922 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 108 136 - -
Adu01g00861 922 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 47 63 - -
Adu01g00861 922 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 331 343 - -
Adu01g00861 922 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 886 - -
Adu01g00861 922 Gene3D - 52 418 - -
Adu01g00861 922 MobiDBLite consensus disorder prediction 880 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00861 Adu-Chr1 11512061 11520442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00861 5 917 Ion Channels AT3G51480 55.628 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00861 K05387 - gmx:100789442 1449.88