Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00857 ATGAGCAAAGATTGGGTTCTTATTGTGTTTGTGATATTTGTTTCAAGTAGTGGAATATTATTCAGCAATAATGTTTGTGCAAAACCACCTCCTAATGTTAACATAGGAGCAATTTTAGCTCTCAACTCAACCATTGGAAAGGTGGCGAAAATTGCTATAGAAGCAGCAGTGAATGATGTAAATTCAGATTCAACCATTCTCAGTGGAACCAAGCTTAACATCTCTATGCAAGACACAAAATTATCAACTGGATTTCTAGGAATCATTGACTCATTGCTATTGATGGAGAAGGACACTGTGGCCATAATTGGTCCACAATACTCAGTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTTCAATTTCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTAGCAGATGTTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAGCCTGATGATACCAATGTCAACAAGGAAGAAATGAATAGTGCATTAGTTAAAATTGCTTTAATGGAGTCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCATATTGCACAATCATTAGGCATGATGATAAGTGGTTATGTGTGGATAGTTACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCTACAACTTCAATCATGAATGATATGCAAGGTGTTATCACCTTGAGAATGCACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTTTAAACACTTTAAGGGGTGATGGTGATACCCTTCATCTTGATGCTATGGGAATGTTTCTTAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACCGGTTTAACCGGCCGAATAGAGTTTTCTCAAGATGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATTCTTCTGGCCTTCACACTGGTGAACAAGTTCCAAATCATGGAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAATTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTGAAGGCACTGACAAGTTTAGTGGTTATTGCATTGATGTGTTCACAGCTGCCTTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAGCCAATCCATTGAATTCATTACTTCTTCAGAGGGTCACACTTGGTGAGTTTGATGCTGTGGTGGGCGACATTACCATTACCACAAACAGAACTAAGATTGTGGATTTCACACAACCATACATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTAGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACTCTTGGCCGATTAGTCTTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTGGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAAAGAATTGGTTACTTGAGAGGATCATTTGCTGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATGACCCTTCAGAATATGAGAAGGCGTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAAGTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGTTGGGGCTTTGCCTTTCCAAGAGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTCTCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAGAAGTGCTTGTAGCTCAGAAGGTGCAAAGCAAGGGATAGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTCATTGCTCTCCTTTGCCATGTTATTAGAATGACCTACCGTTTTAAGAGGCATTATTCAAACAACACTACTAGTAATGACAACCTTGGAGGCTCATCATCTTCTTCTTCGCGTTCTTCTCGTATCAAATCTTTCTTTTCATTTGTCAATGGAAGAGAAGAGGAAGAAGAGATGGAAGATAAAAATGGGAAAAAGAGAAGGCGCAAAGATAACAGAGTGGCTCATGAAGGAGAGGTTTCAACATTGCATGATTCAAACGTTAGCATCCATGTTGAAAATGGTGCCTAA 2826 0.3938 MSKDWVLIVFVIFVSSSGILFSNNVCAKPPPNVNIGAILALNSTIGKVAKIAIEAAVNDVNSDSTILSGTKLNISMQDTKLSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADVIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDTNVNKEEMNSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMISGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMHTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDAMGMFLNGSMLLQKILEVNRTGLTGRIEFSQDGNLMNPSYEIINVIGTGVRRIGFWSNSSGLHTGEQVPNHGNSSEGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTEGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKANPLNSLLLQRVTLGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFAENYLTDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLASRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLETKSFWGLFLLIGIACFIALLCHVIRMTYRFKRHYSNNTTSNDNLGGSSSSSSRSSRIKSFFSFVNGREEEEEMEDKNGKKRRRKDNRVAHEGEVSTLHDSNVSIHVENGA 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00857 941 Gene3D - 51 407 - -
Adu01g00857 941 PANTHER GLUTAMATE RECEPTOR 25 937 - -
Adu01g00857 941 PIRSF IGluLR_plant 1 938 IPR017103 -
Adu01g00857 941 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 25 937 - -
Adu01g00857 941 CDD GluR_Plant 471 813 - -
Adu01g00857 941 Gene3D - 149 432 - -
Adu01g00857 941 Pfam Ligand-gated ion channel 815 846 IPR001320 GO:0015276|GO:0016020
Adu01g00857 941 Pfam Receptor family ligand binding region 51 417 IPR001828 -
Adu01g00857 941 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Adu01g00857 941 SUPERFAMILY Periplasmic binding protein-like II 449 815 - -
Adu01g00857 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Adu01g00857 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Adu01g00857 941 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 328 340 - -
Adu01g00857 941 Gene3D - 583 718 - -
Adu01g00857 941 Gene3D - 728 820 - -
Adu01g00857 941 Pfam Bacterial extracellular solute-binding proteins, family 3 483 814 IPR001638 -
Adu01g00857 941 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Adu01g00857 941 Gene3D - 463 582 - -
Adu01g00857 941 MobiDBLite consensus disorder prediction 897 923 - -
Adu01g00857 941 CDD PBP1_GABAb_receptor_plant 34 432 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00857 Adu-Chr1 11465929 11470843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00857 1 918 Ion Channels AT1G42540 57.372 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00857 K05387 - gmx:100790502 1437.94