Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu01g00854 | ATGATGTCGTGTTCTCCATCATCATCATCATCTGAAGAAGAAGATGAGAGCTTTGAATCTTATCGAAGAGGAGGGTATCATGCTGTTAAAATTGGTGATCAATTTGCAGGTGGTAGGTACATAGCACAAAAGAAGCTTGGTTGGGGTCAATTTTCCACCGTTTGGCTTGCTTATGATACTAAAGATGAGAAATATGTTGCTCTAAAGATCCAGAAAAGTGCAGCACAATTTGTTCAAGCTGCACTGCATGAGATTGATATCCTTTCAGCCATTGGAGAAGGAACTCCTTCACACACAAAATTTGTTGCTCAACTAATTGATCACTTTAAGCACACAGGTCCAAATGGCAATCACCTTTGCATGGTTCTTGAGTTTCTTGGTGACAGTTTGCTTCGTCTAATCAAATACACACGTTACAAAGGAATTCCATTGAAAAAAGTTAGGGAGATTTGCACTTGTATATTGATTGGTTTGGATTACTTGCATAGAGAACATGGCATCATCCACACTGACCTAAAACCCGAAAATATTCTTCTTATTTCTCCCATCAATCCATCTAGAGACCCTTTAAGCACAGGAGCATCTCCCATTCTAGAAAGACCTGAGGGAAGCATCTCTCCATCTCCTAGTCACATGGAGAAGAGGCTTAAGAGGAGGGCGAGGAGGATGAGTATGAGTTTATCAATGGGGCGAGGCGATTCAATAGACGAATATCCGAAAAGGAACATAGAAGAAATTGATGTTAGGTGCAAGATAGTTGATTTTGGGAATGCTTGTTGGGCTGATAATCAATTTACAGATTTGGTTCAAACAAGGCAGTATAGAGCTCCTGAGGTTATATTGCAAGCTGGCTATTCCTACTCTATTGATATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCCACTGGTGATATGTTGTTCAACCCTAGGGCTGGACAGGGTTTTAGTGAGGATGAGGATCACCTTGCTTTGATGATGGAACTCCTAGGAAAGTTCCCTAAGAAGATGGCTACTTCTGGGGCGAAATGTAAGGATTTCTTTGACAGATTTGGAGATTTGAAAAGAATTAGGAGACTAAAAATGTGTCCACTGAAGAAACTGTTGGTTGAAAGATACAAATTTTCAGAGAAAGATGCCAATGAATTTTCAGAATTTCTTTTGCCACTTCTTGATCTTTCACCAGAGAAAAGGCCAAGTGCACAACAATGCTTGCAACACCCTTGGATCAAGGACATAGACTATGCTCCATTTGACATCATCAATAATGGAAATAGTCTTGAAAATCTCAATGTTGGCATGAGAAACCTTCAAATTGCTGTAGGGAAGTGA | 1332 | 0.4002 | MMSCSPSSSSSEEEDESFESYRRGGYHAVKIGDQFAGGRYIAQKKLGWGQFSTVWLAYDTKDEKYVALKIQKSAAQFVQAALHEIDILSAIGEGTPSHTKFVAQLIDHFKHTGPNGNHLCMVLEFLGDSLLRLIKYTRYKGIPLKKVREICTCILIGLDYLHREHGIIHTDLKPENILLISPINPSRDPLSTGASPILERPEGSISPSPSHMEKRLKRRARRMSMSLSMGRGDSIDEYPKRNIEEIDVRCKIVDFGNACWADNQFTDLVQTRQYRAPEVILQAGYSYSIDMWSFACIAFELATGDMLFNPRAGQGFSEDEDHLALMMELLGKFPKKMATSGAKCKDFFDRFGDLKRIRRLKMCPLKKLLVERYKFSEKDANEFSEFLLPLLDLSPEKRPSAQQCLQHPWIKDIDYAPFDIINNGNSLENLNVGMRNLQIAVGK | 443 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu01g00854 | 443 | PANTHER | OS07G0472400 PROTEIN | 9 | 417 | - | - | |
| Adu01g00854 | 443 | ProSiteProfiles | Protein kinase domain profile. | 40 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu01g00854 | 443 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 410 | - | - | |
| Adu01g00854 | 443 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 | |
| Adu01g00854 | 443 | SUPERFAMILY | Protein kinase-like (PK-like) | 34 | 417 | IPR011009 | - | |
| Adu01g00854 | 443 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 9 | 417 | - | - | |
| Adu01g00854 | 443 | MobiDBLite | consensus disorder prediction | 190 | 212 | - | - | |
| Adu01g00854 | 443 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 69 | IPR017441 | GO:0005524 | |
| Adu01g00854 | 443 | CDD | STKc_SRPK | 29 | 410 | - | - | |
| Adu01g00854 | 443 | Pfam | Protein kinase domain | 41 | 179 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu01g00854 | 443 | Pfam | Protein kinase domain | 249 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Adu01g00854 | 443 | Gene3D | Phosphorylase Kinase; domain 1 | 26 | 125 | - | - | |
| Adu01g00854 | 443 | SMART | serkin_6 | 40 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu01g00854 | Adu-Chr1 | 11419416 | 11423111 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu01g00854 | 8 | 413 | EF-hand Containing Proteins | AT5G22840 | 48.807 | 3.48e-156 | 451 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | CMGC_SRPK | Adu01g00854 | Pkinase | 1.9e-23 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu01g00854 | K08832 | - | gmx:100811724 | 635.18 |