Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00853 ATGAAGTATGCAAATTTGAATGATGATTCATTGCTTCAGAAGGAGTTATCTCCAATGAACCTTGTAAGATCCTTGTCAGCTCCTCTATCAGGAAGATTTAGCCGCTTTTCGAACGGTGATCAAATTCGGAAGAAGCTTGAAGATCTTGAAAGGATGTCTTTTGATGCTAAGAAGAAGAAGAAAGATAGATTTGGAATTAGAGAAAAAGTTTCTTATCTTAAACAAAAGTTTGGTCTAAGAGGCAAGATTTTTGCCAAAAGGATTCATTCAATGGTTGAAACTCCTAATAGCATTGAAGATGGTTTCATGGTGAGAGACATTAGAAGTGGACCAACTGTTCTCATGAAACATGGGAGAAACCATGATAACTTCACCGAGGTTCCTCCTAGTCCTGCATCTATGTGTAGCAGTGTTCATGAAGAACTTTGGAGGCAGAATGCAATTTTAAGTCCAATTTCAACTCCAAGTGTATCTTCAGTAGATGATAGCATTATGCCACAGGTTTATGGAGATATCAGCTCTGATTTAAATGAACTAAGTAAGCAACTTAGCCAACTTGAGTTTGACAGCTCAGAGGAATTCGCAACAAAGCGAAAATCTGCCGAGTACAAATTAGAACGGCTACTCGATCCGGCGGAGACTTATATAAGAGATCTTCTTGTTGCTTCTGGACTTTACTTTGGATCATGGGACAAATACCTTCAAAGAGAGGACACATTTACAAAGCCTATAGCCAACTCAATTTTTGAAGAAGTGGAAGAATCTCACAAGAAATGTTTGGTTAAAGAGAATATTATTGATAACAAGTTAGATCACAAAATGTTACTTGATTTGTTAAACGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAAATTCAGAAGGAAACTCAATAATTCATGCATAATACAAACTCCACCATGTGGGAAGGAACTATTGAAGCTAGTATGGGACATTATCCATGTTTCGTTGTATCCTCCAATGTCTAACACATGTTCTTATTCATTTGATAGTTTGAAGGCACAAGATTTTGGATCCATGTCATTGTATGGACTAATGAATGATGAGATCAATGTCTTAGAAATGGAGATGGCATGTTCAATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATGGGATTTTAA 1161 0.3669 MKYANLNDDSLLQKELSPMNLVRSLSAPLSGRFSRFSNGDQIRKKLEDLERMSFDAKKKKKDRFGIREKVSYLKQKFGLRGKIFAKRIHSMVETPNSIEDGFMVRDIRSGPTVLMKHGRNHDNFTEVPPSPASMCSSVHEELWRQNAILSPISTPSVSSVDDSIMPQVYGDISSDLNELSKQLSQLEFDSSEEFATKRKSAEYKLERLLDPAETYIRDLLVASGLYFGSWDKYLQREDTFTKPIANSIFEEVEESHKKCLVKENIIDNKLDHKMLLDLLNEALSIVLGQPLTMSKFRRKLNNSCIIQTPPCGKELLKLVWDIIHVSLYPPMSNTCSYSFDSLKAQDFGSMSLYGLMNDEINVLEMEMACSISDDLVEELIKDMMGF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00853 386 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 6 383 - -
Adu01g00853 386 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 6 383 - -
Adu01g00853 386 Pfam Domain of unknown function (DUF4378) 214 378 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00853 Adu-Chr1 11417348 11418926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00853 6 383 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 38.875 8.89e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00853 - - adu:107478751 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00853 01 11417348 11418926 Adu01g00853 01 11417348 11418926 ECH
Adu05g00329 05 3526343 3531278 Adu01g00853 01 11417348 11418926 PCT