Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00847 ATGAAGAACACCTTGCTCACCACCCTCCTAGTCTTCAAGAACACCATTAGAGAAGAGTTGATCAGGAGTGTGCATGTATACCAAATAAAGGATGGGAAAGTAAGGGAAGTTGAAAGAGAGTTTGTGTTCTCAGAGAGTGGCTCCTATGGCGAAATGAGGTCCACACCAATCCTCAGATTGCAGAAGAAGCTTTGTGTTGCTGAAGTTTCTGAAGGGTACCAAAATGGAGTGTGGCTTTGTATCTTTTCCTTTCATAGAAATCACAAGCCTCAATTTTCCAGCATTCCAAACTTGCTTTTGCTCTCAAGAAACCTGAAGCTTCGGACAATCCCAACCTTGCTGAGAGACCTCCGTGTGATATACAAATTGGAAAAAGACAAAGATGTTCTATCAGACTCCACAGGGGAAGAACGCCAAGGAAACAACAAAGATTCCCAACCATTGAGAAAAGTGGTTCCCGTGTTAACTCAGGACCTGAATTTTCTTCCTTATGAAGATGACATGTCCGAATCACCAGACAACAAGCTAGATGTCCAAGCCTTGCCAGATGCAGATTCTGCAGAAAAGAAAAAACGTGCATCTAGTGACCGGGTAGCAAAAATAACGTTATCAGAGTTAGTCAAGTATTTTGATATACCGATTGTAGAAGCGTCAAGAAGGCTAAATGTTGGACTAACAGTTCTGAAGAGGAAATGCAGAGAATTCGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGAAATTCAGGAAGAAGCGAACAACCAAGAATCGGATGACAAGGCTGCAGCATTGGCGGCAATAGAGAAACGAAGGATGTTGGAGAGCGAAAAGGAAAACATAGAAAGGAAACCATTCATGGACATACAAAGTGAGACCAAGAAGTTGAGGCAGGACATCTTCAAGAGAAGGCATCGGGCGCGAGCTCAGGTCAAACATAATTCGACTGTCTCCGGCAGCAGCAGTAGCAACAAAACTACCATTGAAACTTGA 1011 0.4322 MKNTLLTTLLVFKNTIREELIRSVHVYQIKDGKVREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIFSFHRNHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQPLRKVVPVLTQDLNFLPYEDDMSESPDNKLDVQALPDADSAEKKKRASSDRVAKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEANNQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQVKHNSTVSGSSSSNKTTIET 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00847 336 MobiDBLite consensus disorder prediction 166 194 - -
Adu01g00847 336 Coils Coil 270 290 - -
Adu01g00847 336 PANTHER PROTEIN RKD4 10 317 IPR044607 GO:0003700
Adu01g00847 336 MobiDBLite consensus disorder prediction 318 336 - -
Adu01g00847 336 Coils Coil 245 265 - -
Adu01g00847 336 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Adu01g00847 336 Pfam RWP-RK domain 200 248 IPR003035 -
Adu01g00847 336 MobiDBLite consensus disorder prediction 310 336 - -
Adu01g00847 336 PANTHER PROTEIN RKD5 10 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00847 Adu-Chr1 11361233 11365558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00847 16 328 AtRKD Transcription Factor Family AT4G35590 46.037 3.47e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu01g00847 RWP-RK 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00847 - - adu:107475952 625.165