Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00846 ATGCTTTGGCTCTCTCTCTTCTGCTCAAAACCCTTCATCCTCTACCCTCTCCAAGGCTCAGTATTCAGCAGCGCCGGGAAGAGCCAGTTCTCGGAGATTGCAAGCGGCAGCATCATCGATGACGGGACTAGTTCGCTTCCATCTTCAAGTGGCCAGATCCTGGAGAGGCCTAATTTGAAAGTGTTCAGTTTCGGGGACCTGAAATCCGCGACAAAGAGCTTCAAATCAGATACATTGCTCGGTGAAGGTGGGTTTGGCAGAGTATATAAAGGGTGGTTGGATGAGAAGACACTCACACCAGCAAAGGCAGGGTCAGGGATGGTGGTTGCTATCAAGAAATTGAACTCTGAAAGCACTCAAGGGTTTCAAGAGTGGCAGTCAGAAGTAAACTTCTTAGGAAGGCTTTCTCACCCGAACCTGGTAAAGCTATTAGGGTACTGTTGGGACGACGATGAGCTTCTACTTGTGTATGAGTTCATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCAGAAGGAATCCTAACATAGAACCACTTTCATGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGGGGCCTCGCTTTCTTGCACGCTTCCGAAAAACAAGTCATATACAGAGATTTCAAGGCTTCAAATATACTACTTGACGGGAATTACAACGCGAAAATATCGGATTTCGGCTTGGCTAAATTGGGCCCTGCTGTGGGAGCATCACATGTAACTACCAGAGTCATGGGCACATATGGCTATGCTGCTCCGGAGTACATTGCAACAGGTCACTTGTATGTGAAGAGTGATGTCTACGGCTTTGGCGTAGTTCTACTTGAAATGATGTCAGGCTTGCGCGCGCTCGATACAAAGCGGCCGACAGGGCAACAGAATCTGGTTGAATGGGTTAAGCCTAATCTCTCCAACAAGAGAAAGTTGAAAACCATAATGGATGCTAGGATTGATGGCCAATATTCACAAAAGGCGGCGCAGCAGGCGGCGCAACTCACTCTGAAATGCTTGGAACCGGACCCCAAAAACCGACCGTCGATGAAAGAAGTTGTGGAGGCATTGGAAGCCATAGAATCAATGCAAGATAAATCCAAGGAGTCCAAGAATAGAGGTTCTCATTCTTCTGCAGCCTCTAAGAGTCACCATCATTCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 1188 0.4714 MLWLSLFCSKPFILYPLQGSVFSSAGKSQFSEIASGSIIDDGTSSLPSSSGQILERPNLKVFSFGDLKSATKSFKSDTLLGEGGFGRVYKGWLDEKTLTPAKAGSGMVVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAVGASHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMMSGLRALDTKRPTGQQNLVEWVKPNLSNKRKLKTIMDARIDGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIESMQDKSKESKNRGSHSSAASKSHHHSRQRVSKAKV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00846 395 PANTHER OS01G0588500 PROTEIN-RELATED 41 371 - -
Adu01g00846 395 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 41 371 - -
Adu01g00846 395 MobiDBLite consensus disorder prediction 358 395 - -
Adu01g00846 395 MobiDBLite consensus disorder prediction 377 395 - -
Adu01g00846 395 CDD STKc_IRAK 80 359 - -
Adu01g00846 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Adu01g00846 395 Gene3D Phosphorylase Kinase; domain 1 58 159 - -
Adu01g00846 395 Coils Coil 352 372 - -
Adu01g00846 395 SUPERFAMILY Protein kinase-like (PK-like) 48 357 IPR011009 -
Adu01g00846 395 MobiDBLite consensus disorder prediction 358 374 - -
Adu01g00846 395 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Adu01g00846 395 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00846 395 Pfam Protein tyrosine and serine/threonine kinase 77 356 IPR001245 GO:0004672|GO:0006468
Adu01g00846 395 Gene3D Transferase(Phosphotransferase) domain 1 160 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00846 Adu-Chr1 11354964 11359013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00846 60 366 Glycoside Hydrolase AT3G07070 51.299 1.37e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu01g00846 PK_Tyr_Ser-Thr 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00846 - - gmx:100794193 612.453