Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00841 ATGAAATATAAGCATGATGTGTTCATCAGCTTTAGAGGCACCGATGTCCGGCGTGGTCTGCTTAGCCATCTGAAGAAAGATCTGCACCGTGAGAAGATTGATTTCTATGTAGATGATGCTAAACTTAAGAAGGGAGATAAAATATTATCACTACTCACGGCAATTGAAGAGTCGCTAATTTTGTTAGTTATATTCTCAAAAGACTATGCTTCTTCGAAATGGTGTTTGGCTGAGCTCGAAAAGATAATAGAGTGTGCTGAAAAAAATGAACAAATTGCTGTGGTACCTGTCTTCTATAAACTAGATCCATCAGAGGTGCGGCACCAGAGAGGAGATTATGCTGCTGCTTTTGTTAAACATGAAGCTAGGGAAGACAAGGTCAAGGTACAAAAATGGAGATATGCTCTAACTAAAGCTGCTGAATTTTCAGGATTTCATTATCCGATGGACTCTGAGTTGGATGAATCCGATGTTGTTGATGAAATTGTAGAAGACATTTGTAGCAAACTGAGAAAGTTTTCCTCAAGTGAATCAGATGACCCAGCTAAATCAAATGGCCTTGTTGGAATTGATAAAAATATTGGATGGATTAACTCCTTAATGACAAATAATTCAGAACAAGTTCTAAAGATTGGGTTTTggggcatgggtggcataggtaagacaaccattgctcaacttgtgtttgaCAAATTTTCTCACCAATATGAGGGCTGCTACTTCTTGGAGAATATAAGAGATGAACTGAAAAATAATCAGTTAAATTATTTAAGAGACGAAGTTGTTTCTAAGCTATTAGGGGAAGAAAATCATCATATAACTGGTGCAAGCAGGGCAAATTCCTCCACCATGAGGAGGCTAAGTAAGAAGaaggttatccttgtgctagataatgtgaatactccaaagcttctaagagatttcctcgaaccaattgacttggggccagggagtagagtgattgtaactagcagaaatcagcaagtgtttactgcaggagtatttcatgaaatacaccatgtcaaggagctgaactctgaagaatcccttgaactcttctgtttaaatgccttcaatgaaagccaacccaaaaggggattcaaagagctatctagagaggcagttgctattgccaagggtgtcccattagctttaaaagtttttggttcatatttccattctaaaagtagtgacatatggaaatgtgccctagaaagattcaagaagtatcctgatcctgatggggaaattcaaagtgtgttgaggtttagttatgatgaattacatgacatagagaaaaaggtttttctagatattgcattctttttcaaaggagaagataaagattatgtcataaGCCAGCTGGATGCTTGGAACTTTCATGGACCTAGTGGAATAGCCTCTCTCCAAGAGAAAGCTCTTATAACCATTTCAAAGGACAATAAAATACAAATGCATGATTTATTGCAAAGAATGGGTTGGGAAATAGTTCGTCAAGAATCTGCTACTCCCGGACGACGAAGCCGAGTGAATGATCCAGAGGAAGTGTATGACATATTGAAGAATAACAAGGGAAGTGATTCAGTGGAAGGCATACTGTTAGATTTATCTCAAATCGGAGAGGTAGCCTTGAATGTTGACAGCCTTAAAAAGATGCCTAATCTAAGATTAATCAAGGTTTACTCTCCATTGCCTATTGAGGTTCCTATGCAAATTAGATATTTTATACCACAGGATTTTCTCAGTGTGCTTTACAAAAGAATAAAAATGGATGACTTGACAGAAGAGTTATTGGAAGAATCTGGAAGCTTGAATCAATCATGTGATAATGAGGATATCGATGATGTCGTTGAAACTATCAAGGGAACTCAAGTAGATGGCATAAAAATTCTTGACACTATTATAGAGATGCATATTTTGGGAATGCCTAAATTAAACATGCCGATGCATGTGGAGCATCCTATGCCTGGTTTGCCGATAATGCAGGATTTGGTAAAGGATACAAAGGGTATATCCACTCAGCCTCTGATGCTGTCGAAGTTGTCTAAGTTGGGGGGTGTTCATAAATTGGCAAATTACAATGAAAATGATGGAGTTCTGGTTTTAGCAACAAATGATCTAAGTAGATCAATGCCACAGCGGAATCCCAACATTGGATCTGCAGTGAAAGAGTTGATCAGCCTTGGAAGTGAGTTTCACGTGAAATCCACTCACCATCTTTTCATGGAAGGTTCCTCAGTTTCAAAGGGCTTGTCCTTCTCAACAAAGGAAATAAGATCAATAAATTCAACCCTTAACAGAACGGAAGCATTGAACTCCTCCGTGGAGCTCTTCAAGAATCTTGAATGCTCAGATGCTAAAGCTCTACAATGTTATGCAGAGACTAGAATGGAACTATTGAACTCCTCCACGGGGTGCTTCATTTCTCATGATTACTCAGATATTGATGATCTGCAACTTGAGACTACCCGTAAAGATGAGTTATCTTTTCTGAGATCTACAAACTATTACAGGCTTTCTAATTGCAGAGAGAATAAACATATTGGGAAACCGAAGCTTCTAGTCCTGTTTGATGGGCTACGGTATTCCGAACAAATGTCTATCTTGGTTCTTGGTGGATCGAGCCTCCAATGGAGTTATTTATGGTGCATAAGTAATAATTCTCAGTTTATGCAACTTCCTGTTGGTCCTCAGTTAACGAATTGTGTAAAATTGTCTCTAGAAGTATCTCCAGGGAGTTTGCCTTCGCCTTTGCTTTTGAGCATCATGCATCTTCCTCCGCATCTTAAAAGCCTGTCAGTGCGTGGTGGTAGAAGTTTTTGGCATAAAATAAAGCTTCCACCATTCATTCCAGACGTGCGTACTTGCCGCAGAATGCGCATGTGGCGGGAAAGTTTGCCATCGAAGATCAATCATCATGTGTATATGGAACACCTGTCATTGCCTAGAAATTTACAGCCTATAATGGAGTTTCCAACATCCATTCAATCCTTGGATATTGATGGCTACATTATGCCAGAGGGTTTGTCTTCAAGCTTCACTTATCTTCCACATCTTGAAAGCTTGTCATTGGATTATTGTACAGACCTTCCGTTTACATCAGAGCTTCCATCATTCGTTCAATCTTTGGAAATTTCCAACGGCATTATTTTAAAGAGTTTGTCTTCAAACTTCAAGTATCTTTTACATCTTAAAGTCCTGCCTTGGAGAGATTGTAGCAATTTTCGATTTACATCAGAGTTTTTATCATCCATTCAATCATTGAAAGTTTCCAACTGTCTTATGTTGAAGAGTTTGTCTTCGAGTTTCAAGTATCTTTCTAATCTTAAAGACCTGACATTGAAAAATTGTAGCAATCTTCGATCTATATCAGAGCTTCCATCATCCATTCAGTCCTTAAAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCATCGAGGTTCAAATATCTCTCTAGTCTTAAAGACTTGACATTGAGAGATTGTATCAATCTTCGATGTATATCAGAGCTTCCACCATCCATTCAATACATGGAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCTTCGAGCTTCAAGTATCTTTCTAGTCTTAAAGATCTGACATGGAGAGATTGTAGCAATCTTCGATCTATATTAGAGCTTCCACCATCTATTCAATCCTTGGAAATTTCCAACTGCATTATGATGGAGAGTTTGCCTTCGAGCTTCAAGTATCTTTCTAGTCTTAAAGATTTGATATTGAGAGATTGTAGCAATCTTCGATCTATATTAGAGCTTCCACCATCTATTCAATCCTTGGAAATTTTCAACTACATTATGATGGAAAGTTTGCCTTCGAGTTTCAAATATCTTTCTAATCTTAAAGATCTGAAATTGAGAGATTGTATCAATCTTCGATTTATATCAGAGCTTCCACCATCCATTCAATACATGGAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCTTCGAGTTTCAAGTACCTTTCTAGTCTTAAAGACCTGACATTGAGAAATTGTATCAATCTTCGATCTATATCAGAACTTCCACCATCTATTCAATCCTTGAAAATTTTCAACTGCATTATGCTGGAGAGTTTGCCTTCGAGTTTTAAGTTTTTTTCTACTCTTGAAAGCCTGACAATAAGCAATTGTAGCGATCTAGAAGAATTTCTTCCTAGCTTTCACCATCCATTCAATACTTGA 4212 0.331 MKYKHDVFISFRGTDVRRGLLSHLKKDLHREKIDFYVDDAKLKKGDKILSLLTAIEESLILLVIFSKDYASSKWCLAELEKIIECAEKNEQIAVVPVFYKLDPSEVRHQRGDYAAAFVKHEAREDKVKVQKWRYALTKAAEFSGFHYPMDSELDESDVVDEIVEDICSKLRKFSSSESDDPAKSNGLVGIDKNIGWINSLMTNNSEQVLKIGFWGMGGIGKTTIAQLVFDKFSHQYEGCYFLENIRDELKNNQLNYLRDEVVSKLLGEENHHITGASRANSSTMRRLSKKKVILVLDNVNTPKLLRDFLEPIDLGPGSRVIVTSRNQQVFTAGVFHEIHHVKELNSEESLELFCLNAFNESQPKRGFKELSREAVAIAKGVPLALKVFGSYFHSKSSDIWKCALERFKKYPDPDGEIQSVLRFSYDELHDIEKKVFLDIAFFFKGEDKDYVISQLDAWNFHGPSGIASLQEKALITISKDNKIQMHDLLQRMGWEIVRQESATPGRRSRVNDPEEVYDILKNNKGSDSVEGILLDLSQIGEVALNVDSLKKMPNLRLIKVYSPLPIEVPMQIRYFIPQDFLSVLYKRIKMDDLTEELLEESGSLNQSCDNEDIDDVVETIKGTQVDGIKILDTIIEMHILGMPKLNMPMHVEHPMPGLPIMQDLVKDTKGISTQPLMLSKLSKLGGVHKLANYNENDGVLVLATNDLSRSMPQRNPNIGSAVKELISLGSEFHVKSTHHLFMEGSSVSKGLSFSTKEIRSINSTLNRTEALNSSVELFKNLECSDAKALQCYAETRMELLNSSTGCFISHDYSDIDDLQLETTRKDELSFLRSTNYYRLSNCRENKHIGKPKLLVLFDGLRYSEQMSILVLGGSSLQWSYLWCISNNSQFMQLPVGPQLTNCVKLSLEVSPGSLPSPLLLSIMHLPPHLKSLSVRGGRSFWHKIKLPPFIPDVRTCRRMRMWRESLPSKINHHVYMEHLSLPRNLQPIMEFPTSIQSLDIDGYIMPEGLSSSFTYLPHLESLSLDYCTDLPFTSELPSFVQSLEISNGIILKSLSSNFKYLLHLKVLPWRDCSNFRFTSEFLSSIQSLKVSNCLMLKSLSSSFKYLSNLKDLTLKNCSNLRSISELPSSIQSLKIFNCIMLESLPSRFKYLSSLKDLTLRDCINLRCISELPPSIQYMEIFNCIMLESLPSSFKYLSSLKDLTWRDCSNLRSILELPPSIQSLEISNCIMMESLPSSFKYLSSLKDLILRDCSNLRSILELPPSIQSLEIFNYIMMESLPSSFKYLSNLKDLKLRDCINLRFISELPPSIQYMEIFNCIMLESLPSSFKYLSSLKDLTLRNCINLRSISELPPSIQSLKIFNCIMLESLPSSFKFFSTLESLTISNCSDLEEFLPSFHHPFNT 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00841 1403 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 145 IPR035897 -
Adu01g00841 1403 SUPERFAMILY L domain-like 984 1273 - -
Adu01g00841 1403 SUPERFAMILY L domain-like 1218 1393 - -
Adu01g00841 1403 Gene3D - 343 429 IPR042197 -
Adu01g00841 1403 PRINTS Disease resistance protein signature 210 225 - -
Adu01g00841 1403 PRINTS Disease resistance protein signature 286 300 - -
Adu01g00841 1403 PRINTS Disease resistance protein signature 378 392 - -
Adu01g00841 1403 PRINTS Disease resistance protein signature 1014 1030 - -
Adu01g00841 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 439 IPR027417 -
Adu01g00841 1403 Pfam TIR domain 4 179 IPR000157 GO:0007165
Adu01g00841 1403 Gene3D Ribonuclease Inhibitor 674 1171 IPR032675 -
Adu01g00841 1403 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 569 - -
Adu01g00841 1403 SUPERFAMILY "Winged helix" DNA-binding domain 416 501 IPR036390 -
Adu01g00841 1403 Pfam NB-ARC domain 197 408 IPR002182 GO:0043531
Adu01g00841 1403 Gene3D Ribonuclease Inhibitor 1278 1401 IPR032675 -
Adu01g00841 1403 Gene3D Ribonuclease Inhibitor 1172 1274 IPR032675 -
Adu01g00841 1403 Gene3D - 175 335 IPR027417 -
Adu01g00841 1403 Gene3D - 2 174 IPR035897 -
Adu01g00841 1403 ProSiteProfiles TIR domain profile. 3 170 IPR000157 GO:0007165
Adu01g00841 1403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 569 IPR044974 GO:0006952
Adu01g00841 1403 SMART till_3 4 142 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00841 Adu-Chr1 11244320 11251894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00841 5 561 WRKY Transcription Factor Family AT4G12020 31.786 5.63e-60 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00841 - - adu:107475985 2717.18