Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00815 ATGCGCATCGCAGTTCCAACGACGACGACGACTTCCATGGCCGGCGACGAGAGACAAACTTCTTACCGTGTTCTGGCGGATCGGTGTCGGACACTGGAGGAGGAACAAGCCAAGCTCAGGGAACAGTTCCGCCAACTCTTGCAGGAGAAGGAAGAGGAAGAAGAAGAAGTGGTGGTTGCAGATTCAACGCTGCGTTTTCTTTCGGGGAACTTCTTCTCGGATAGTCCGTACGCTAGCGTGTTGAAATGCATGGGACACGCCGTTCATGTCTACAGAGCTTCCTCCGGTGAGATCATATATTGGAATCGTTCAGCAGAAACACTGTATGGATGGAAAGACTATGAAATCATTGGTCAAAGAGTTGCTAAGTTCCTTGTTACCGAAGAGTGTTATGAATCTCTGCAGAATATTCTAGAAAGGTTGATCAGAGGAGTTCCATGGTCTGGAAAGTTTCCTTTCAAGAAGAGATCTGGTGAAGTATTCATAGCAATAGTGACTAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTATTATCACTGTTTCTAGTGATGCCGCTGTATTTAACTCAATGGATTCAGAAAATAGAAGTTACCAACCTGGTAACAATGGCAAAGCTGGAGGACAGAGGATAAATTTCAAAAGAATTCAGTGGCCTCCACGACCGTTGATTGCATCATCTGTCTCTAATCTGGCATCAAAGATTCTCCTAAATCGGCATCCGGATGATGCATTTTCCAGGAATACTACAACAGATGGAGATGAAGAAAAACACAGCATTCATGAAAAAGAACGTCATTCTAGTCATCAGAGAAGTGAAAACAGAACTTTTAGGGAGGTGTCCGAGAAGGTTAAGTCTACTATTGCAGCCAGAGTCCTAGCCAAGCTACAAACAGGGGGAAGTGAAAAATGTGGGAAGGATGATGGAAGCATTAAAAGTAATTGCACGAATGATTGTTCCGGAAGTAAGAGAGTGAATAATGAGGGTGATTCTTCTGGAGGCTCAGTAGCTTTAACTCCACGCAAGGATGGTGCTAATGAAGAGGATAGAGAAGACCCATTGTTAAGATTACACTGCAAATTTAATCCAAAGAAAAAGGAACAAGAAGCTATAAATATGGTGATAGAAGATGAAATGAAAAAGCAACAAGAAGGACTGCAATTGCAAAGTACACGAGAAAGCACTGGCAGTAATGGAGGCAGTAATGGAAGTTCATCAAGTAAGGGTGACAATGAGTCAAACTCTATTGTGAAGTCTGAAATCCATTGGGAAAACCTTCAATTAAGAGAGGAGATTGGTCAAGGGTCTTATGCAGTTGTGTATCACGGAATATGGAATGGATCGGATGTTGCTGTCAAGGTTTACTTTGGGAATGGATACACAGAGGAGACCTTACATGACTACAAAAAAGAGATTGATATAATGAAGAGACTAAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCGCAGGAAAGGCTTGCCATTGTAACAGAACTATTACCTAGGGGAAGCCTTTTCAAAATTCTGCACAAGAGTAATCAGCCACTAGATATCAGAAGGCTTTTAAGGATGGCTCTTGATGTTGTGCGTTTCCTCTCTCTCTCAAACACCACATTCATAAACGGATATTAA 1644 0.4221 MRIAVPTTTTTSMAGDERQTSYRVLADRCRTLEEEQAKLREQFRQLLQEKEEEEEEVVVADSTLRFLSGNFFSDSPYASVLKCMGHAVHVYRASSGEIIYWNRSAETLYGWKDYEIIGQRVAKFLVTEECYESLQNILERLIRGVPWSGKFPFKKRSGEVFIAIVTKTPLYEDGELVGIITVSSDAAVFNSMDSENRSYQPGNNGKAGGQRINFKRIQWPPRPLIASSVSNLASKILLNRHPDDAFSRNTTTDGDEEKHSIHEKERHSSHQRSENRTFREVSEKVKSTIAARVLAKLQTGGSEKCGKDDGSIKSNCTNDCSGSKRVNNEGDSSGGSVALTPRKDGANEEDREDPLLRLHCKFNPKKKEQEAINMVIEDEMKKQQEGLQLQSTRESTGSNGGSNGSSSSKGDNESNSIVKSEIHWENLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLHDYKKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKILHKSNQPLDIRRLLRMALDVVRFLSLSNTTFINGY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00815 547 PANTHER SERINE-THREONINE PROTEIN KINASE 25 534 - -
Adu01g00815 547 MobiDBLite consensus disorder prediction 243 285 - -
Adu01g00815 547 MobiDBLite consensus disorder prediction 385 415 - -
Adu01g00815 547 ProSiteProfiles Protein kinase domain profile. 427 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00815 547 ProSitePatterns Protein kinases ATP-binding region signature. 433 454 IPR017441 GO:0005524
Adu01g00815 547 MobiDBLite consensus disorder prediction 343 357 - -
Adu01g00815 547 MobiDBLite consensus disorder prediction 311 335 - -
Adu01g00815 547 SUPERFAMILY PYP-like sensor domain (PAS domain) 87 185 IPR035965 -
Adu01g00815 547 MobiDBLite consensus disorder prediction 299 357 - -
Adu01g00815 547 Pfam PAS domain 94 185 IPR000014 -
Adu01g00815 547 MobiDBLite consensus disorder prediction 246 285 - -
Adu01g00815 547 ProSiteProfiles PAS repeat profile. 95 145 IPR000014 -
Adu01g00815 547 MobiDBLite consensus disorder prediction 382 415 - -
Adu01g00815 547 Coils Coil 22 63 - -
Adu01g00815 547 TIGRFAM sensory_box: PAS domain S-box protein 94 185 IPR000014 -
Adu01g00815 547 SUPERFAMILY Protein kinase-like (PK-like) 413 534 IPR011009 -
Adu01g00815 547 CDD PAS 96 185 IPR000014 -
Adu01g00815 547 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 25 534 - -
Adu01g00815 547 Gene3D PAS domain 90 188 - -
Adu01g00815 547 Gene3D Phosphorylase Kinase; domain 1 420 504 - -
Adu01g00815 547 Pfam Protein tyrosine and serine/threonine kinase 427 533 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00815 Adu-Chr1 10941568 10945409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00815 13 534 MAP Kinase Kinase Kinase AT4G23050 38.526 1.94e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu01g00815 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00815 - - gmx:100813707 621.698