Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00793 ATGGTATTCGTCCTGCACTGTGACGACAACTATGCAAATACTGGTCAGCTACCAATTGATGTCTTCGCACAAGCATGGGTACTTGCTGAGGATATCTTGAAAAAGGGTCATATAGACAGAAGGGTCGAACTAGTGGATGAGAACGAGAAGCCATTGAATGCATCAATCCACCTGTGGCTGCAGTTTTCTGAAGCTAGAAAGTGGCTAGGGTTTCCCACCAGCTGCTTTCCACAGAGAATTGGATGTGAGGTTACTCTTTTCCAAGATGCTCATACCCCGGATGACTTTGTCCAGAGAAAAGCCGATGCCGGACTTGGGAAATACGAGTCCCACGGATGCTGGAAGGATATGTTTGATAAAATCAATGAAGCAAAACACTTCATATACATTACAGCCTGGTCTCTTGACACTAAGATAACCCTCATAAGGGATCCGACCATGAAGCCTGGAAGTGTCCCAACACTTGGTGAGCTGCTCGAGAAAAAGGCAAAAGCTGGTGTAAGAGTTGTACTACTTCTTTGGAACGATATAACAGCTGTTCGGTTATTTAAAAATCAAGGACTCATGGGTACTTGTGACAAAGAAACCGAACGGTATTTCAAAGGCACTGCTGTGGAGTGTGTTCTACGTACTCATGAGAAATGGATGTGTTCTCATCACGAGAAAGTGGTGATTGTGGACTCTCCATTGACCAATATTGCGAAGAGAATATTAGTGTGTTATATCGGGGGTTTAGATCTCTGCAAAGGAAGATTCGACACTCCATCACATCCACTTTTTAGCACTTTGGGCCCGGACGGTGAGCACAGCAGGGATTTTCATCAACCCAACTTTAAAGGTACTGCAATCACAACAGTTGACGATGAATACATAATCATTGGATCAGCCAACATCATCCAGAGATCCATGGATGGTGGTAGAGACACTGAGATTGGCATGGGAGCTTACCAACCCTACTATTTGGCTAGAGGGCCAAACGGTGCAACGGGCCAGGTGCATGGTTTCCGCATGTCCTTGTGGTTGGAGCATCTTGGCAAACATGAAAGCACCTTCCTCAACCCTGAGAGTAAAGCATGTATTGAGAAGGTGAACCAGCTTGCTGAACAGAATTGGAAATCATATTGCGATATATCTAGCGTTGACCTTCATGGCCACCTTCTTCGCTATCCTTATCACATTTCTGACGATGGAACCATCACAGAGCTTCCTGGATTTGAGTTCTTTCCCGACACCAAAGCTAAGATTCTAGGAAAGGATGGGATATACATGAGGCTTCCATTTATTCGGGATCTTCTTCTAGGTTGA 1305 0.449 MVFVLHCDDNYANTGQLPIDVFAQAWVLAEDILKKGHIDRRVELVDENEKPLNASIHLWLQFSEARKWLGFPTSCFPQRIGCEVTLFQDAHTPDDFVQRKADAGLGKYESHGCWKDMFDKINEAKHFIYITAWSLDTKITLIRDPTMKPGSVPTLGELLEKKAKAGVRVVLLLWNDITAVRLFKNQGLMGTCDKETERYFKGTAVECVLRTHEKWMCSHHEKVVIVDSPLTNIAKRILVCYIGGLDLCKGRFDTPSHPLFSTLGPDGEHSRDFHQPNFKGTAITTVDDEYIIIGSANIIQRSMDGGRDTEIGMGAYQPYYLARGPNGATGQVHGFRMSLWLEHLGKHESTFLNPESKACIEKVNQLAEQNWKSYCDISSVDLHGHLLRYPYHISDDGTITELPGFEFFPDTKAKILGKDGIYMRLPFIRDLLLG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00793 434 SUPERFAMILY Phospholipase D/nuclease 73 257 - -
Adu01g00793 434 SUPERFAMILY Phospholipase D/nuclease 284 360 - -
Adu01g00793 434 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 219 251 IPR001736 GO:0003824
Adu01g00793 434 Pfam Phospholipase D C terminal 349 418 IPR024632 -
Adu01g00793 434 PANTHER PHOSPHOLIPASE D ALPHA 3 284 421 - -
Adu01g00793 434 PANTHER PHOSPHOLIPASE D ALPHA 3 22 283 - -
Adu01g00793 434 Pfam Phospholipase D Active site motif 218 251 IPR001736 GO:0003824
Adu01g00793 434 Gene3D Endonuclease Chain A 92 274 - -
Adu01g00793 434 PANTHER PHOSPHOLIPASE D 284 421 IPR015679 -
Adu01g00793 434 PANTHER PHOSPHOLIPASE D 22 283 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00793 Adu-Chr1 10686052 10690432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00793 281 423 Phospholipase D Gene Family (Wang group) AT1G52570 63.448 5.78e-50 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00793 K01115 - sspl:121795050 249.595