Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00785 ATGGCTACTACCAAGTTCAGACATGTCTTTGGTAGATTATGGGGTTTTGCTACTTCTTGTAAGAAAAATAATAGCACCCCAATTGGCTCAAGAATTCTCCAAAGGGATGTGGAAAAGGAAGAATTTCAGTATGCTAGTATTCTATGCCTATCAAAATACTATAGTGTCTTTGTGGTTCGCCTTGCAATCATGGTTATGCTAGCTATCTTGATTGGTCTTCTTACCATACTAACATGGCATTTCACAAAGATTTATACAACAAAATCTCTCAATAGCTTAGCCTATGACTTGCGTTATGAGCTTCTACAACGCCCAATCTTGAGGATGTGGAACATTTTGAATTCTACTTCTGAAATTACAATGGCTCAGGTCAAGCTTTCTCAGTACGTGATTAGAAGCCATGGCAATCTTACCACTCAAGAAAACCAAGTGGAGATGTATGAAGCAATGAGAGCAGTAACATGGGCACTTTTTGCTAGTAGAAAAGCTCTTAACTCAATCACTGTCAAATACAATAATGGTTTTGTTCAAGCATTCCATAGAGACCTTAAAGATAACAACACATTCTACATTTACTCTGATCTTGCAAATTATTCCATTGGTGCAAGTGCAAGTAGCTATAACAGTGACATTAATTATTCATCACTTTCTTCACATGAATCTTGGAATGATCATGACAACAAGTCTGCTGTATGGTATCGCCAGCCGTTGGATCCTGTCACCGGCGAAAAGATTGGAAAAGCAATGCAGATTGCCCCAGAAGACTCAATCCACATAGCAGGCCTATCCCAGGTCCCTGATGGGGTGGCTTCATGGCGTGTTGTCGTGAGCAAGTTCACAGATTCGCCTTTGCTTTCGGCTGCATTGCCTGTTTGGGATGCTTCTAACAAGAGTATTGTGGCTGTGGTGGGAGTAACAACTGCACTTTATAGTGTAGGACAGTTAATGAAGGAGCTTGTTGAGTTGCATAGTGGACATATGTATTTAACTTCTCTAGAAGGTTACTTGCTTGCAACTTCCACTGATGTACCTCTTCTTACAAATTCAACAAAGCCTCCTAAGCTTAAGATGGCTGTAGATTGTGAAAATGAAGTGATAAGGCTTGGAGCTGAGTATTTGAAGAAAAGTTCTGGTAACAAATTCCCTCCTAGCCATGAGGTTCATGTTGCGAATGTCAGGCTAGGCCACGACAGATATTACATCGATTCGTTCTTCCTAAACTTGAAGAGACTTCCTATGGTTGGTGTAATAATCATTCCAAGAAAGCATATATTAGGACAAGAAGATAAAAGAGCCTTCAAGACTTTGGTGATTCTGATATCTGCATCAATGTGTATTATAGTCATTGGATGGGTTTGCATTTTGATTTTGACAAATGGAGTCTCAAAGGAAATGAAACTAAGAGCAGAACTTATTAGTCAGCTTGAAGCTAGAAGAAAGGCAGAGGCATCAAGCAATTATAAGAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGCCTACTCGACATTCTTATGTCCGACGACTGTCTAACCAACGAGCAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGACTGCGCTGCTCCGGCTTCTTAATAACATCTTGGATCTCAGCAAGGTGGAATCAGGAAAGCTAGTTCTAGAAGATGCTGAATTCGACTTGGGAAGGGAACTTGAAGGACTAGTGGATATGTTTTCTGTGCAATGCATGAATCACAGTGTAGAGACTGTCTTAGACCTATCTGATGATATGCCGAAGCTAGTTCGCGGCGACTCTGCTAGAGTAGTCCAAATTTTTGCAAATTTGATCAACAACTCAATTAAATTTACTCCTTCTGGTCACATTATTCTGAGAGGATGGTTTGAGAATCCAAATCCATGTAGTGATAATGCAAATCATCTGATGGAAGAGAAGAATTTACAGTGTGCACAAAAGACTAGAACAAGGCAACATGAGAACCATGCAAAGAGGACTTCTAAAGCAATCCTATGGTTTGAAGTCGATGACACCGGCTGCGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCATCAACTACTAGACTGCATGGAGGCACTGGCCTTGGTCTTTGCATTGTCAGAAGCTTGGTTAATAAGATGGGTGGAGAAATCAAAGTTGTCAAAAAGGAAGGCCCCGGAACACTGATGAGATTATACCTGCGCCTCGATACGGCCGGGGATGCCACAGAACAACATTGTTTGGTAGATATTGCAAACAATGGCTTAGTGGTATTGCTTGCACTGCACGGCAACATGGGAAGATCAATCACATCTAAATGGCTGCAGAAAAATGGGTCCAAGTTACTTAGCATACAAGAAATCAAGAATCCAGTTTTTGTCATCGCAGTCGACATAGGACTACTCGATTTGAGCACAGATATATGGAAGGAGCAGCTTAACTTTCTTCACAGATATGTGGGGAGAGCAAAATTTATATGGGTTCTAAACCATGACACCTCTAACACCATTAAAATGGAGCTTAGAAGAAAAGGATATATGATGACAGTTAACAAACCACTTTACAAAGCAAAAATTGTTCACATTTTGGAGGAAGTTGTAAAAGAGAGAAATCATGAGATGCAAAAGAAGAACATGGATGAGCTTCATGAGAGTGATTATACTCATTGTGATGCTGCTAGCTCGGACGATTCAGACATATCCGAATCAGGTCCTTGTAATCCTGTTAGTAGTACTGAAAAAAAAAGTGAGAAGGTTGAGCAGTTTCATAGATTATCACTGTATAGGATTAACAACTGCTTAATAGGATTAACAGATGAACATTCAGAAGCTAATAACACTCCAAAGAAGGAAGAGTTATGTCAAAATAACCAAAACTCTCCAAAATCATTGTCTCCAGAACAAGATTATTTTCCAAGAGAAGCTCATCAAGGTGAAGATTCTGAGAGCAGAGGAAAAGAAGAGCATAGGATCATCGGCGGCTCGGCTAGACCGGTAAATGGAAAGAAATCTCTTGAAGGGTTAAGGATATTGCTTGCAGAAGACACACCTGTGATTCAAAGAGTTGCAACCATAATGCTTGAGAAGATGGGAGCAAGTGTTGTAGCAGTTGGTGATGGACAAGCAGCAGTGGATGCTTTGAATGGCTTGCTTGGTGTTGAAGATTTTAGAAGAGACTCAAACTTGAATGAAAGGAACACAAGATCATCATCTTCTCAAACTGAAATTCTCAGTTTCCCTTCATATGACTTGGTCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAAGCAACAAAAGCAATAAGAAAATCAGAAGTGGGAAGTGGAGTTCACATTCCAATAGTTGCTCTCACTGCTCATGCAATGTCATGTGATGAAGCCAAATGCTTAGAAGTTGGAATGGATGCTTATTTAACCAAACCAATTGACTTCAAATTAATGGAATCCACTATTCTTTCTCTCACAAGAAGAACAATATCCTGA 3519 0.4013 MATTKFRHVFGRLWGFATSCKKNNSTPIGSRILQRDVEKEEFQYASILCLSKYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTSEITMAQVKLSQYVIRSHGNLTTQENQVEMYEAMRAVTWALFASRKALNSITVKYNNGFVQAFHRDLKDNNTFYIYSDLANYSIGASASSYNSDINYSSLSSHESWNDHDNKSAVWYRQPLDPVTGEKIGKAMQIAPEDSIHIAGLSQVPDGVASWRVVVSKFTDSPLLSAALPVWDASNKSIVAVVGVTTALYSVGQLMKELVELHSGHMYLTSLEGYLLATSTDVPLLTNSTKPPKLKMAVDCENEVIRLGAEYLKKSSGNKFPPSHEVHVANVRLGHDRYYIDSFFLNLKRLPMVGVIIIPRKHILGQEDKRAFKTLVILISASMCIIVIGWVCILILTNGVSKEMKLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAIIGLLDILMSDDCLTNEQCATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCMNHSVETVLDLSDDMPKLVRGDSARVVQIFANLINNSIKFTPSGHIILRGWFENPNPCSDNANHLMEEKNLQCAQKTRTRQHENHAKRTSKAILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRSLVNKMGGEIKVVKKEGPGTLMRLYLRLDTAGDATEQHCLVDIANNGLVVLLALHGNMGRSITSKWLQKNGSKLLSIQEIKNPVFVIAVDIGLLDLSTDIWKEQLNFLHRYVGRAKFIWVLNHDTSNTIKMELRRKGYMMTVNKPLYKAKIVHILEEVVKERNHEMQKKNMDELHESDYTHCDAASSDDSDISESGPCNPVSSTEKKSEKVEQFHRLSLYRINNCLIGLTDEHSEANNTPKKEELCQNNQNSPKSLSPEQDYFPREAHQGEDSESRGKEEHRIIGGSARPVNGKKSLEGLRILLAEDTPVIQRVATIMLEKMGASVVAVGDGQAAVDALNGLLGVEDFRRDSNLNERNTRSSSSQTEILSFPSYDLVLMDCQMPKMDGYEATKAIRKSEVGSGVHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTRRTIS 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00785 1172 Gene3D - 1003 1166 - -
Adu01g00785 1172 Pfam Response regulator receiver domain 1020 1160 IPR001789 GO:0000160
Adu01g00785 1172 MobiDBLite consensus disorder prediction 959 976 - -
Adu01g00785 1172 PANTHER OSMOSENSOR HISTIDINE KINASE 798 1168 - -
Adu01g00785 1172 ProSiteProfiles Response regulatory domain profile. 1019 1167 IPR001789 GO:0000160
Adu01g00785 1172 CDD REC_hyHK_CKI1_RcsC-like 1020 1163 - -
Adu01g00785 1172 Pfam His Kinase A (phospho-acceptor) domain 488 553 IPR003661 GO:0000155|GO:0007165
Adu01g00785 1172 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 791 - -
Adu01g00785 1172 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 600 747 IPR003594 -
Adu01g00785 1172 ProSiteProfiles Histidine kinase domain profile. 494 748 IPR005467 -
Adu01g00785 1172 MobiDBLite consensus disorder prediction 899 928 - -
Adu01g00785 1172 SMART HisKA_10 487 553 IPR003661 GO:0000155|GO:0007165
Adu01g00785 1172 PANTHER OSMOSENSOR HISTIDINE KINASE 3 791 - -
Adu01g00785 1172 MobiDBLite consensus disorder prediction 907 922 - -
Adu01g00785 1172 Gene3D - 475 554 - -
Adu01g00785 1172 PANTHER TWO-COMPONENT HISTIDINE KINASE 798 1168 - -
Adu01g00785 1172 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 475 554 IPR036097 GO:0000155|GO:0007165
Adu01g00785 1172 CDD HisKA 488 549 IPR003661 GO:0000155|GO:0007165
Adu01g00785 1172 SMART HKATPase_4 600 748 IPR003594 -
Adu01g00785 1172 MobiDBLite consensus disorder prediction 982 1003 - -
Adu01g00785 1172 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 542 745 IPR036890 -
Adu01g00785 1172 MobiDBLite consensus disorder prediction 953 1008 - -
Adu01g00785 1172 SUPERFAMILY CheY-like 1016 1168 IPR011006 -
Adu01g00785 1172 SMART REC_2 1018 1163 IPR001789 GO:0000160
Adu01g00785 1172 Gene3D - 555 751 IPR036890 -
Adu01g00785 1172 PRINTS Bacterial sensor protein C-terminal signature 673 687 IPR004358 GO:0016310|GO:0016772
Adu01g00785 1172 PRINTS Bacterial sensor protein C-terminal signature 691 701 IPR004358 GO:0016310|GO:0016772
Adu01g00785 1172 PRINTS Bacterial sensor protein C-terminal signature 708 726 IPR004358 GO:0016310|GO:0016772
Adu01g00785 1172 PRINTS Bacterial sensor protein C-terminal signature 732 745 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00785 Adu-Chr1 10623366 10629898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00785 5 1168 Histidine Kinase Gene Family AT2G17820 61.878 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu01g00785 HATPase_c 1.3e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00785 - - gmx:100801970 1766.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00785 01 10623366 10629898 Adu01g00785 01 10623366 10629898 ECH