Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00761 ATGATGGCAACACTCCTCAGAAAACTCTGCGTTTGCAGTGAAACGGCGTCGTATAACAACCACCGACCCTCATCCGAAGCTGCTGCTTCTTCAGGTTCGTTACTGGAATCACTTCCAAGCGAGATTGTGATGCAGATCGTACGGTTATTGGGCCCAAAGCAGGCCGCACAGCTCAGCGTGGTTAACAGAAAGTGGCGATCCCTCATCTCCGATAACGAACTCTGGGCCCACTTTCTTGAGGTCCACAATCCTCAGCCATGGGATTCCGTGCTTTTCTCCGAGACTTTTCTGGCCTCTGCTTACCCTCTTCTTCCTCTTCCAACCTCAGTTGCTGAGATTCCATCTGTGTCATTCAAGCAAGTTTATGGCCAGCGTGCAAGACTGCCTTGTTCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAATATGGTTGGAGCACACTCCCTTGTCCATCATGGCGGTCAGCAACCTTTCTGGAATTTGGTAATGTGGAAACGCCAATATACACCAGACTCAGACACTTTTTTTGGACTATTTATAGCAGGATGAAGGCGAAACCAAGTTCTCAACCAGTTGTTGTTTCTATACCAATATGCCACTATGATGATACTGAATCAGCCAAAGCCTCAAGGCGGCAGCTTAAGGAAGCAATCTATACTGCCCTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTAAATCAGGCAGTTCTAGCTCTGTTTGCTGCCAAACAAACTTCTGGAATAGTTGTGAATATAGGTTTTCAAGTCACATCTGTTGTTCCAATTTTAAATGGCAAAGTGATGCGAAAAGTGGGTGTGGAGGTTGTGGGGTTGGGAGCCCTAAAGCTCACTGGATTCCTTAGAGAACAAATGCAACAGAATAACATGAGTTTTGAATCAATGTACACTGTTCGAATGCTGAAAGAGAAGCTATGCTATGTTGCTATTGATTATGAAGCAGAGCTATCTAAAGATACACAAGCATCATTTGAAGCTGCAGGAGAAGGATGGTTTATACTTAAAAAAGAGCGCTTTCAAACCGGAGAGATCTTATTCCAGCCACGTCTTGCCGGAGTACGAGCAATGGGTTTGCACCAGGCCGTCGCTCTGTGCATCGACCATTGCCATTCTGCAGAATTAACCGCGGACACGAATTGGTTTAAGACCGTAGTCTTATGTGGGGGCAGTGCATGTTTACCAGGTTTGGCAGAAAGATTAGAGAAAGAACTTCATGCCTTGGTTGATCCCAACCTGTCAGACAGAATCACAGTCATACCTCCTCCATATGGCGCGGATACGGCATGGTTTGGAGCAAAGATGATTGGCAATTTAAGTACCTTTCCCGGTCCATGGTGTATAACAAAGAAGCAGTTCCGTCAAAAGCATAAAACTAATCGGATATGGTGA 1410 0.456 MMATLLRKLCVCSETASYNNHRPSSEAAASSGSLLESLPSEIVMQIVRLLGPKQAAQLSVVNRKWRSLISDNELWAHFLEVHNPQPWDSVLFSETFLASAYPLLPLPTSVAEIPSVSFKQVYGQRARLPCSVIIDGGSGYCKYGWSTLPCPSWRSATFLEFGNVETPIYTRLRHFFWTIYSRMKAKPSSQPVVVSIPICHYDDTESAKASRRQLKEAIYTALFDMNVPAVCALNQAVLALFAAKQTSGIVVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQQNNMSFESMYTVRMLKEKLCYVAIDYEAELSKDTQASFEAAGEGWFILKKERFQTGEILFQPRLAGVRAMGLHQAVALCIDHCHSAELTADTNWFKTVVLCGGSACLPGLAERLEKELHALVDPNLSDRITVIPPPYGADTAWFGAKMIGNLSTFPGPWCITKKQFRQKHKTNRIW 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00761 469 Gene3D - 172 463 - -
Adu01g00761 469 Pfam F-box-like 36 77 IPR001810 GO:0005515
Adu01g00761 469 PANTHER ACTIN 91 465 IPR004000 -
Adu01g00761 469 Gene3D - 236 434 - -
Adu01g00761 469 Gene3D - 24 101 - -
Adu01g00761 469 CDD NBD_sugar-kinase_HSP70_actin 132 276 - -
Adu01g00761 469 ProSiteProfiles F-box domain profile. 32 78 IPR001810 GO:0005515
Adu01g00761 469 Pfam Actin 204 460 IPR004000 -
Adu01g00761 469 Gene3D Actin; Chain A, domain 4 279 362 - -
Adu01g00761 469 PANTHER ACTIN-RELATED PROTEIN 8 91 465 - -
Adu01g00761 469 SMART fbox_2 38 78 IPR001810 GO:0005515
Adu01g00761 469 SMART actin_3 129 467 IPR004000 -
Adu01g00761 469 SUPERFAMILY F-box domain 22 125 IPR036047 GO:0005515
Adu01g00761 469 SUPERFAMILY Actin-like ATPase domain 132 251 IPR043129 -
Adu01g00761 469 SUPERFAMILY Actin-like ATPase domain 246 460 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00761 Adu-Chr1 10282178 10286608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00761 178 461 Cytoskeleton Gene Families AT3G12110 30.375 1.06e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00761 K16616 - gmx:100804254 678.707