Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00664 ATGTTTCCCTTCTTGTTCGAACCCCAAAGCGACGAAGAGATCGAACACTCCGAAGAAGAAGAAGCATCCGAACCAGAATCAGAACCAGGATCCGAACCGGAAGAATCAGAAGGAGAAGAAGAAGAAGACGAACAAGAAGCTTCTAGAATCTCAAAGGAGAAGAAGAAGAAGAAAACACAGTCTCCGTGGGACTTCGCCAAGTACACTGAGTCAGTTGCGGAGGAGCACGCTCGCCGGAGTACAACCTCCGTTGACGAAAAAATCTCCAAAGCATTAAAACAGCGCTCAACACCTCTCGCGGTTCCTTCGCAAAACAACGACGTTGACGACTCATCAGATTCCGAACCTGATAAACAGGAAGATTATAGACCAGATGAAGAAGATGAAGAGGAGGGCAATGCGGCTGATAGCAAGTCCTTTTTCGCTCCTTCTGATGGAGCATCTTTCCATGCGGATTCGTTCTTGCAGCTTCATTTGTCACGGCCTTTGCTCAGGGCTTGTGAGGCCTTGGGGTATGCTAAACCAACGCCAATTCAGGCAGCTTGTATACCATTGGCGTTAAATGGTCGTGATATATGTGGAAGTGCCATTACTGGGTCAGGAAAGACAGCTGCATTTGCACTTCCCACATTAGAGAGGTTGTTGTTCCGTCCTAAACGCATGCATGCAATAAGGGTCCTTATTCTTACACCAACCAGAGAGTTAGCAGTACAAGTTCACAGTATGATAGAGAAGCTTGCTCAATTTACTGATATTAGATGTTGCCTGGTTGTTGGGGGTTTGTCAACGAAGGTGCAAGAAGCTGCTTTGAGATCAATGCCAGACATTGTCGTTGCTACCCCAGGACGTATGATAGACCATTTACGTAATTCTATGTCAGTGGATTTGGATGATCTTGCTGTGCTAATCCTTGATGAGGCGGATCGTCTTTTAGAGCTTGGATTTAGTGCTGAAATTCATGAACTTGTTCGCATGTGTCCCAAGAAAAGGCAGACAATGCTATTTTCAGCAACAATGACTGAGGAGGTTGATGACCTTATTAAATTGTCCCTAACAAAACCTGTGCGTCTTTCTGCTGATCCATCTCCATCCACTTCTGTACTCTATACTATGGTAGTTGGCTCTATATGTCATATTCATGCTCCTGTGGAATATATTCTTTTCCCCCTAATACTGATTATGCAAATTATCAATTTATCATGTGAAACTCATTTCAAGGTGGTTAGGATACGAAGATTGCGTGAAGCAAATCAGGAAGCAGTTCTTCTTGCAATGTGCTCCAAAACTTTTACTTCTAAAGTTATCATCTTCAGTGGAACAAAGCAAGCTGCACATAGGTTGAAGATTATATTTGGATTAGCTGGTCTGAAAGCTGCTGAACTTCATGGAAATCTTACTCAAGCCCAGCGCCTTGAAGCTTTGGAACAATTCAGGAAGCAAGAAGTTGACTTTTTGATTGCAACTGATGTGGCTGCCCGTGGCCTTGACATCATAGGTGTTCAAACAGTTATCAACTATGCATGTCCTCGCGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACAGCAAGAGCTGGCCGAGAAGGATGCGCCGTCACATTTGTGACTGATAACGACCGGTCACTTCTAAAAGCAATTGCAAAGAGAGCTGGTTCAAAGCTGAAGAGCCGAATTGTAGCAGAACAATCCATACATAAATGGTCTCATATAATTGAGCAATTGGAGGATCAAATTGCAGAAGTACTTGAAGAAGAGAGGGAAGAAAGAGCCCTAAGAAAAGCTGAAATGGAGGCCACAAAGGCTGAAAACTTGATTGCTCATAAGGAAGAGATCTTTTCCCGCCCCAAAAGAACCTGGTTTGTAACAGAGACAGAAAAGAAGGTTGCTGCAAAAGCAGCAAAGGAAGCTGAAGACCTCAAAATGAAGGAAAAGAGGAAGCGGGAGCGAGAGAAAAATTTGCCGAGAAAGAAGCGTAGAAAATTGGAAGCGGCTAGAGAGATGTTGGAAGATGAAGGAGATGATGACAAACCAGAAGCTAAGGGGGCAAATAAGAAAGAAAAGGGTGGACTTTCACTTGTTGATGTCGCTTATCGACGAGCAAAAGCAGTGAAGGCTGTCAAGAAGGCAATGGATTCAGGCAAGATCGTGAAGAAGAACAAAAAGAATACCAATCGTCCTTCACATAAGTCGTCTTCAAGGACACAGGAGATGCAGGAGCTATTCCAGGCTGACATGAAGGACAAAAAGCCGAAAAGAAGAGGTGCTGGAGCAGGAAAAAAATCTAAGAGTTCGTTCAAGAGCAAGTCAAGGTACAAGCGCAGGTAG 2325 0.4409 MFPFLFEPQSDEEIEHSEEEEASEPESEPGSEPEESEGEEEEDEQEASRISKEKKKKKTQSPWDFAKYTESVAEEHARRSTTSVDEKISKALKQRSTPLAVPSQNNDVDDSSDSEPDKQEDYRPDEEDEEEGNAADSKSFFAPSDGASFHADSFLQLHLSRPLLRACEALGYAKPTPIQAACIPLALNGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRMCPKKRQTMLFSATMTEEVDDLIKLSLTKPVRLSADPSPSTSVLYTMVVGSICHIHAPVEYILFPLILIMQIINLSCETHFKVVRIRRLREANQEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQEVDFLIATDVAARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIHKWSHIIEQLEDQIAEVLEEEREERALRKAEMEATKAENLIAHKEEIFSRPKRTWFVTETEKKVAAKAAKEAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEDEGDDDKPEAKGANKKEKGGLSLVDVAYRRAKAVKAVKKAMDSGKIVKKNKKNTNRPSHKSSSRTQEMQELFQADMKDKKPKRRGAGAGKKSKSSFKSKSRYKRR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00664 774 PANTHER BNAA01G17110D PROTEIN 406 731 - -
Adu01g00664 774 MobiDBLite consensus disorder prediction 635 774 - -
Adu01g00664 774 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 183 357 IPR014001 -
Adu01g00664 774 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 303 311 IPR000629 -
Adu01g00664 774 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 152 180 IPR014014 GO:0003724
Adu01g00664 774 Pfam Helicase conserved C-terminal domain 423 526 IPR001650 -
Adu01g00664 774 MobiDBLite consensus disorder prediction 1 141 - -
Adu01g00664 774 SMART helicmild6 441 526 IPR001650 -
Adu01g00664 774 Pfam DEAD/DEAH box helicase 176 346 IPR011545 GO:0003676|GO:0005524
Adu01g00664 774 Gene3D - 414 661 IPR027417 -
Adu01g00664 774 MobiDBLite consensus disorder prediction 700 718 - -
Adu01g00664 774 Coils Coil 629 653 - -
Adu01g00664 774 CDD DEADc_DDX27 163 358 - -
Adu01g00664 774 PANTHER RNA HELICASE 406 731 - -
Adu01g00664 774 Coils Coil 564 611 - -
Adu01g00664 774 MobiDBLite consensus disorder prediction 45 92 - -
Adu01g00664 774 CDD SF2_C_DEAD 419 535 - -
Adu01g00664 774 PANTHER BNAA01G17110D PROTEIN 68 283 - -
Adu01g00664 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 546 IPR027417 -
Adu01g00664 774 MobiDBLite consensus disorder prediction 12 44 - -
Adu01g00664 774 PANTHER RNA HELICASE 308 361 - -
Adu01g00664 774 Gene3D - 98 359 IPR027417 -
Adu01g00664 774 MobiDBLite consensus disorder prediction 752 774 - -
Adu01g00664 774 SMART ultradead3 171 370 IPR014001 -
Adu01g00664 774 PANTHER BNAA01G17110D PROTEIN 308 361 - -
Adu01g00664 774 PANTHER RNA HELICASE 68 283 - -
Adu01g00664 774 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 421 565 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00664 Adu-Chr1 9040907 9046866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00664 140 543 Eukaryotic Initiation Factors Gene Family AT3G13920 29.703 8.22e-47 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00664 K13181 - gmx:100791233 988.408