Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00616 ATGTCTGGCAACCATTCTTTAAAGGTTGAATTGTCGAAGACGACGGCATTATTGGGTTTGAGGCTGTGGGTTTTGATTGGGATAGGTGTTGGTGCATTCATAGTTCTAATTCTTTGTGTATTACCCGTATGGGTGACATTTCGGAGAAAGTCGAGGAGATCTCTGGACAAGATCCCCATGTCTCAAATTCCAAATGTCTCGAAAGATATCAAGGTTGACAAGGTTGGGGTGCTGAATTGTCATGATCAAGCTGAGAGTGTATATATTCCTGTTCATGACAAGGCAAGTGATAATAATAATTCAGAAAAGTTGTTAGTTCATTTGGGAATGAGCAAATCCAGTGATGCAGATAATATCAGCCAATGCAGCTCGATTTTTCATCACGAGAGAGGGTTTAGTTCGATGTCCGGTGAAGAAGGAAGCTCCAGCACATTTAAGAAGCAGTCTGCATTGGGGATGGTAACTGCATCACCTCTAATTGGTTTGCCCGAGGTTTCTCATCTTGGATGGGGCCACTGGTTCACCCTTAGAGATCTTGAACTTGCAACCAATCGTTTCTCGGCTGAGAATGTGATTGGTGAGGGTGGATATGGAGTTGTTTACAGGGGAAGGCTAATCAATGGGTCTGAGGTGGCAGTGAAGAGACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTGGAAGCTATAGGCCATGTTAGACATAAAAATCTTGTGCGGTTGCTTGGATATTGCATAGAAGGAGTACACAGGTTGCTAGTGTATGAATATGTGAACAATGGTAATTTAGAACAATGGTTACATGGAGCTATGAGTCAACATGGAATACTTACCTGGGAAGCTCGTATGAAGGTTATACTCGGCACAGCCAAAGCGCTTGCTTATTTACACGAAGCAATCGAACCAAAAGTTGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATAGTGAGTTCAATGCGAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGACTCCGGGGAAAGTCACATAACTACTAGAGTAATGGGAACATTCGGTTATGTGGCACCAGAATATGCTAATACTGGCATGTTAAATGAAAGAAGCGACATTTACAGCTTCGGTGTTGTCTTGCTAGAAGTGGTTACCGGAAGGGACCCGGTTGACTATTCCCGTTCCGCGAATGAGGTGAATCTTGTTGAGTGGCTCAAGATCATGGTGGGAACAAGGAGGGCCGAGGAAGTTGTGGACTCTAGCCTCGAAGTGAAACCATCGATGCGTGTCCTAAAGCGTGCCCTTCTGGTCGCACTTAGGTGTGTCGATCCTGATGCCGACAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCAGACGAGTATCCGTTCCGACAGGATCGAAGAACTAGAAAGAGCCGCACCGGCAGTATGGAAATCGAATCTGTGAAGGATAATTCCGGTCCATCGGATGCCGAAATGGTGAAGGGTCCTGAAAGCAATGTGCTTGAGACATCCCAACAATAG 1527 0.4466 MSGNHSLKVELSKTTALLGLRLWVLIGIGVGAFIVLILCVLPVWVTFRRKSRRSLDKIPMSQIPNVSKDIKVDKVGVLNCHDQAESVYIPVHDKASDNNNSEKLLVHLGMSKSSDADNISQCSSIFHHERGFSSMSGEEGSSSTFKKQSALGMVTASPLIGLPEVSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGRLINGSEVAVKRLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMSQHGILTWEARMKVILGTAKALAYLHEAIEPKVVHRDIKSSNILIDSEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGMLNERSDIYSFGVVLLEVVTGRDPVDYSRSANEVNLVEWLKIMVGTRRAEEVVDSSLEVKPSMRVLKRALLVALRCVDPDADKRPKMSQVVRMLEADEYPFRQDRRTRKSRTGSMEIESVKDNSGPSDAEMVKGPESNVLETSQQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00616 508 CDD STKc_IRAK 192 458 - -
Adu01g00616 508 SUPERFAMILY Protein kinase-like (PK-like) 170 462 IPR011009 -
Adu01g00616 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Adu01g00616 508 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
Adu01g00616 508 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Adu01g00616 508 Pfam Protein kinase domain 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00616 508 PANTHER OS01G0323000 PROTEIN 2 504 - -
Adu01g00616 508 Gene3D Phosphorylase Kinase; domain 1 166 261 - -
Adu01g00616 508 MobiDBLite consensus disorder prediction 464 479 - -
Adu01g00616 508 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00616 508 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00616 508 Gene3D Transferase(Phosphotransferase) domain 1 262 474 - -
Adu01g00616 508 Coils Coil 206 226 - -
Adu01g00616 508 MobiDBLite consensus disorder prediction 464 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00616 Adu-Chr1 8469895 8474162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00616 19 460 Trihelix Transcription Factor Family AT1G70460 39.732 5.14e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu01g00616 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00616 - - gmx:100813931 844.343