Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00600 ATGGGAATCCATATTATGAAGATTTTGATCAAACACAAACACTCATTTGGTTTCTCAATCTCCATTCGATTGAAAACTACGTCGGCTCAGTATGTCGCCTCGAGAGTTCGAGACCCCACATTTGAGAAGCTCATGGACAAGTACAAGAGCCTCTTCAAAGTCATTGCCATTCAAGATCTCATCCTCGCAAATCCCGGGAATCCGTCCGTGTCCATTGACTTCCTCTCCAGGCTCTCCCAGAAACTCCATCTCAACCGCGGTGCCACTTCCTTCCTCCGCAAGTTTCCTCACATCTTCCAAATTTATTATGACCCCTCCAAGTTGCTGCCTTTTTGCAGGCTCACAGATGCTGCTCTTGATGTTTCCAAGCAGGAAGAGAAGGCCATTAATGCTTCTTTGCCAATGGTGGCTGATCGATTGGTCCGGATATTGTCCATGTCTGCGTCCAAAACAGTTCCCCTTCGAGCGATTTTCAAGGTCTGGAGGGAGCTTGGGCTGCCTGATAATTTCGAGGACTCAGTTATATCTGCAAATCCTAGTGTTTTCCAGCTGTGTGATGCCCATGAACCTAACACTCATTTGTTGAAGCTGGTTGAAGGTGTTCGTCGAAATGGTTTTAGAGCAGACATTGAAGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGATTGCAATGTCAGGACAGAATTGCGGTTCAGTTTTAAGCATGGGTATCCTCCAGGGATGAAACTTGGCAAGAACTTCAAGGCCAAGGTGAAAGAATGGCAGAGTTCACCGTACGTTGGGCCCTATGAGGTGGTTGTTGGGGAGAAAAAGAAGTCTAAGGCAGCATTGATGGCCATGGAGAAACGAGCAGTGTCGATTGTTCACGAGTTCCTGAGTTTAACCGTGGAGAAGATGGTAGAAGTTGAAAAGATCAGCCAATTCAGAAAATGGTTTGGGATTGACTTCAACATAAGAGACCTGTTCTTGGATCACCCAGGGATCTTCTATCTATCAACAAAGGGGAAACGCCACACTGTTTTCTTGAGGGAAGCATATGAACGAGCAGCAGCGACAATGATGGCATTGAAGCAGAAGAAACCCAACAAAGGCATGGCTCATTATCTTCTTGAGCGATCAAGGTTTTGCTGTAATTTTCACTTTTTGGTGACCTTGCTTTGTTTTCAAGATTATGGCTCCTGGAATTTACTTATGTTGCTCAAAAGCATTTCAAATGTGCTTGCAATGAATATAACTATTGCCTTTGTCGGCTTCTGTAGCATTATTCAAGAAATTTGGTGGCTTAGAAAGTGTATATTTAACGACAAAAGGGACACTACTGGATTGGAGACAACACAGGTAAGGTCATAA 1350 0.4452 MGIHIMKILIKHKHSFGFSISIRLKTTSAQYVASRVRDPTFEKLMDKYKSLFKVIAIQDLILANPGNPSVSIDFLSRLSQKLHLNRGATSFLRKFPHIFQIYYDPSKLLPFCRLTDAALDVSKQEEKAINASLPMVADRLVRILSMSASKTVPLRAIFKVWRELGLPDNFEDSVISANPSVFQLCDAHEPNTHLLKLVEGVRRNGFRADIEDWRVVECCKEDCNVRTELRFSFKHGYPPGMKLGKNFKAKVKEWQSSPYVGPYEVVVGEKKKSKAALMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERAAATMMALKQKKPNKGMAHYLLERSRFCCNFHFLVTLLCFQDYGSWNLLMLLKSISNVLAMNITIAFVGFCSIIQEIWWLRKCIFNDKRDTTGLETTQVRS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00600 449 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 11 349 IPR045040 GO:0003723
Adu01g00600 449 Pfam Plant organelle RNA recognition domain 36 349 IPR021099 GO:0003723
Adu01g00600 449 PANTHER OS04G0618900 PROTEIN 11 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00600 Adu-Chr1 8209826 8211747 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00600 - - gmx:100808404 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00600 01 8209826 8211747 Adu01g00600 01 8209826 8211747 ECH
Adu01g00600 01 8209826 8211747 Adu09g01228 09 27525100 27538349 PCT