Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00564 ATGCACACAAGCTGTTTGATATGTTGTTTCAACTGTTATAGTGAGAACCCTGCTTCTAGAAGTTCTCATGAGTTCTTCTTCTGTTGCCACTTTGGTTCCTTTAAGGAAACTATGAAGTTTGGAAACGTTTACTCTGAATTCAGTTGTCCAGACAGCAAGCAACTCTCCATGAACTTCATTTGTAGATCAGTGACTCCTTTCTTGTTCATCATAGTTTTTCTTTTTCCTCTGACTACTATTGCTGCTGATCTGAGCTCAGACAAGCAAGCTCTTCTTGATTTCGCCAATGCCATTCCTCACCGTCGAAATCTTCAGTGGAATCCTGCATCCTCAGTTTGTACATCTTGGGTAGGCATAACTTGCAATCAAAATGGAACTCGTGTTATCTATGTCCGGCTCCCCGGAGTTGGACTAGTCGGCGCAATTCCGACCAACACACTTGGCAAGCTTGATGCTGTAAAAATCATTAGCCTTCGGTCCAACCTACTTGGTGGAAATCTGCCTGCTGACATTGCGTCTCTTCCGTCTCTCGAGTATCTTTATCTGCAGCATAACAACCTTTCCGGTGACATACCTTCCTCATTGTCACCTAAACTCAATGTACTCGATTTATCATATAATGCCTTCACCGGAGGCATTCCAAAGACACTGCAAAATTTGACAGAATTAACTAGTTTGAATCTCAAGAACAACTCATTATCTGGAGAGATACCTAATCTAAATGCTACTAGTCTCAGGAACTTGAATTTAAGCTACAACCATTTGAATGGTTCTATCCCTTCGGCTCTTCAGATTTTTCCCAACTCCTCTTTTGAAGGAAACATTCTCTTATGTGGACCACCTTTAAAGCCATGCTCCGGGGTTCCACCAGCAGCTCCACCAGCTGTGACACCGGCTCCACGGCCATCTATTGGAAGCTCAAAGAATAAACTGAGTAAAGTAGCTATCATTGCAATTGCGGTTGGAGGAGGCGTGCTGCTTTCTCTTGTAGCTCTTGTTATTGTCCTTTGCTGTGTAAAGAAGAAAGATGAGGAAGAAGCTCCTAGTGCAGTTAAAGGGAAGGGTTCTATTGGAGGTAGGAGTGAGAAGCCGAAAGAACAGTTTGGTAGTGGAGTGCAAGAACCCGAGAAGAACAAGCTGGTTTTCTTCGAGGGAAGCTCTTACAATTTTGATCTTGAGGATTTGCTAAGAGCTTCGGCCGAAGTTTTGGGAAAGGGTAGCTATGGAACTGCATACAAGGCTATACTAGAGGAGTCGACCACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTTGGTAAGAAGGACTTTGAGCAGCAGATGGAGATCATTGGAAGGGTTGGACAACACCAAAATGTGGTGCCTCTTCGCGCTTATTATTATTCGAAAGATGAGAAGCTTCTGGTTTATGATTATGTCCCTAGTGGCAACTTATCCTCCCTCTTGCACGGCAACAGGGCAGGTGGAAGAACTCCATTAGATTGGGACACACGTCTTAAAATCGCTCTCGGAACAGCCAGAGGACTAGCTCACCTTCATTCTGTTGGTGGTCCGAAATTTGCACATGGAAACATTAAGTCCTCAAATGTGCTAATCAACCATGATAAAGACGGCTGCATTTCTGATTTCGGCCTAGCCCCTCTTATGAATGTGCCTGTAACACCTTCTAGAGCTGTAGGTTACCGTGCACCCGAGGTAGTTGAGACCAGAAAGCACTCTCATAAATCAGATGTGTACAGCTTTGGTGTCCTACTGCTAGAGATGCTTACGGGGAAAGCGCCACTTCAGTCTCCCGGACGCGAGGACATGGTTGATCTGCCTAGGTGGGTCCAATCTGTTGTTAGGGAAGAATGGACTGCCGAGGTTTTCGACGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGCTGCAAATAGCCATGACCTGTGTAGCAAAGATGCCGGATATGCGGCCGAACATGGATGAAGTGATGAGAATGATAGAAGAGGTCCGGCAATCTGACTCGGAGAACCGGCCGTCTTCTGAAGAGTATAAGTCCAAGGACTCAAATGTTCAAACTCCATAA 2079 0.4493 MHTSCLICCFNCYSENPASRSSHEFFFCCHFGSFKETMKFGNVYSEFSCPDSKQLSMNFICRSVTPFLFIIVFLFPLTTIAADLSSDKQALLDFANAIPHRRNLQWNPASSVCTSWVGITCNQNGTRVIYVRLPGVGLVGAIPTNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLEYLYLQHNNLSGDIPSSLSPKLNVLDLSYNAFTGGIPKTLQNLTELTSLNLKNNSLSGEIPNLNATSLRNLNLSYNHLNGSIPSALQIFPNSSFEGNILLCGPPLKPCSGVPPAAPPAVTPAPRPSIGSSKNKLSKVAIIAIAVGGGVLLSLVALVIVLCCVKKKDEEEAPSAVKGKGSIGGRSEKPKEQFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKKDFEQQMEIIGRVGQHQNVVPLRAYYYSKDEKLLVYDYVPSGNLSSLLHGNRAGGRTPLDWDTRLKIALGTARGLAHLHSVGGPKFAHGNIKSSNVLINHDKDGCISDFGLAPLMNVPVTPSRAVGYRAPEVVETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGREDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKMPDMRPNMDEVMRMIEEVRQSDSENRPSSEEYKSKDSNVQTP 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00564 692 MobiDBLite consensus disorder prediction 667 683 - -
Adu01g00564 692 MobiDBLite consensus disorder prediction 667 692 - -
Adu01g00564 692 ProSiteProfiles Protein kinase domain profile. 397 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00564 692 MobiDBLite consensus disorder prediction 349 372 - -
Adu01g00564 692 SUPERFAMILY Protein kinase-like (PK-like) 401 675 IPR011009 -
Adu01g00564 692 Gene3D Ribonuclease Inhibitor 242 286 IPR032675 -
Adu01g00564 692 PANTHER LRR RECEPTOR-LIKE KINASE 45 692 - -
Adu01g00564 692 Gene3D Ribonuclease Inhibitor 84 241 IPR032675 -
Adu01g00564 692 ProSitePatterns Protein kinases ATP-binding region signature. 403 434 IPR017441 GO:0005524
Adu01g00564 692 Pfam Leucine Rich Repeat 176 196 IPR001611 GO:0005515
Adu01g00564 692 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515
Adu01g00564 692 Pfam Leucine rich repeat N-terminal domain 85 122 IPR013210 -
Adu01g00564 692 PANTHER OS05G0588300 PROTEIN 45 692 - -
Adu01g00564 692 Pfam Protein kinase domain 400 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00564 692 Gene3D Phosphorylase Kinase; domain 1 365 472 - -
Adu01g00564 692 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Adu01g00564 692 Gene3D Transferase(Phosphotransferase) domain 1 473 690 - -
Adu01g00564 692 SUPERFAMILY L domain-like 89 285 - -
Adu01g00564 692 CDD STKc_IRAK 403 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00564 Adu-Chr1 7760198 7763804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00564 70 690 Receptor kinase-like Gene Family AT5G58300 67.666 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu01g00564 Pkinase 3.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00564 - - gmx:100796171 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00564 01 7760198 7763804 Adu07g01142 07 16706906 16711367 PCT