Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00554 ATGGGTGGGAGGATGAGGCGGCGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAAAGTGGTGGAGGATGTTAAAAACAACCCGGAAGCGGCGACGAGCGGGACGGTTCTGCGGCGGAGGCTGCAGCTGATGATGTACAACAACATGTTCAGGATAATGTTCGACAGAAGGTTCGAGAGCGAGAAGGATCCAATGTTCCAGAAGCTTCGGCTGCTGAACGGAGAAAGGAGTAGGTTGGCTCAGAGCTTTGAGTATAACTACGGTGACTTCATTCCCATTTTGAGGCCATTGTTGAGAGGATACTTGAAAATATGCAAGGAGGTCAAGGACACTAGGTTGAAGCTCTTCAAGGACCATTTCGTTGAGGAGAGAAAGAAATTAGAGAGCACAAAGAGAACCCACAACGAAGGCCTAAAATGCGCAATGGATCACATTTTGGATGCACAGAGAAAAGGCGAAATCAATGAGGACAACGTTCTTTACATTGTCGAGAATATTAACGTTGCTGCAATAgagacaacactatggtcaattgagtggggaatagctgagttagtgaaccacccagaaatccaaaagaaagtaagagatgaaattgatagagttttaggagcaggacaccaaataactgagccagacacacacaagctcccataccttcaagcagtcatcaaggaaacattaaggctaagaatggcaattccactccttgttccacacatgaacctccatcatgcaaaccttggtggctatgatatccctgctgagagcaagatcttggtcaatgcatggtggcttgctaacaaccctgctaagtggaacaaccctcaagagtttaggcctgagaggttcttggaagaagagTCCAAGGTTGAAGCTAATGGAAATGATTTCAGGTACCTACCGTTTGGTGTGGGGAGGAGGAGTTGCCCAGGGATCATTCTTGCATTGCCTATACTTGGCATCACATTGGGACGTTTGGTGCAAAACTTTGAGCTCTTACCTCCCCCTGGACAGTCCAAGCTTGACACCACTGAGAAAGGAGGGCAGTTTAGTCTTCACATTCTCAAGCATTCCACCATTGTTGCCAAGCCCAGATCATTTTGA 1110 0.3117 MGGRMRRRKXXXXXXXXXXKVVEDVKNNPEAATSGTVLRRRLQLMMYNNMFRIMFDRRFESEKDPMFQKLRLLNGERSRLAQSFEYNYGDFIPILRPLLRGYLKICKEVKDTRLKLFKDHFVEERKKLESTKRTHNEGLKCAMDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKVRDEIDRVLGAGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHHANLGGYDIPAESKILVNAWWLANNPAKWNNPQEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTTEKGGQFSLHILKHSTIVAKPRSF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00554 369 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 18 369 - -
Adu01g00554 369 Coils Coil 8 9 - -
Adu01g00554 369 PRINTS E-class P450 group I signature 45 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 263 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 311 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 301 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 159 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 179 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS E-class P450 group I signature 222 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 18 369 - -
Adu01g00554 369 Gene3D Cytochrome P450 11 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS P450 superfamily signature 302 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS P450 superfamily signature 170 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 PRINTS P450 superfamily signature 223 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 Coils Coil 20 28 - -
Adu01g00554 369 Pfam Cytochrome P450 22 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 SUPERFAMILY Cytochrome P450 38 367 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu01g00554 369 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 304 313 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00554 Adu-Chr1 7621766 7627410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00554 21 368 Monolignol Biosynthesis Gene Families AT2G30490 82.471 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00554 K00487 - nnu:104593756 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00554 01 7621766 7627410 Adu07g01169 07 17310281 17314881 PCT