Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00551 ATGGAGACATGTTTTCACACACCTAATCCCAATGCAACCCAACAAACAGAGGGTGATGATGAGACAAAGAGAGTCCAAAATCACAGTCACACACAGACAACCCTCAGAATCACCCGCGGCGGTGGTGTGTGTGTGTCTTCAAGTGTCGTGCATGCATTTTATGCATCTCTTGCTTTGCATGCACTCTCTCTCTTCTCTTTCTCTCTCTTCCCTTTCTCTCTCTACACACAGACTATCCCTTCTTCTTCAATCCCTTCCTTGCCTTCTCTCTCTACAAAATCACCCAAGTTGAATTTTGGGATTGAATGGGTTCCGACATTTGCGTCAATGTGCGGATTTATGGAGGAATGGAAGCGTGAGATAATTGATACATTATCTGCAAATGAGTATTCACTATTCTGTAATAACTTCCACCGTCGCGAAACTGGATGGAAGGAGTGTAACTTTTGCAACAAGCCTATCCATTGTGGATGCATAGCATCTAAATCTTTGTTCGAGTACCTTGACTTTGGCGGTGTAGGATGTGTTAGCTGTGTAAATGCTTCCCAACTACGTTTGACGAGGAATACTGAAAATGGGTCTGTTTCGACTACCAAAAATAATGCAAGTGATCGGCATTCTGCGCATATTGACAACAGACAGTTTGTCAGTAGCGTGGATGAAGGAAAACTTATGGAGTTCTGCAGAATTGTTGAAGCTAGCGAATCAAGCCGTTGGAATCATGCTCAGAGAGACAACATAATCTCATGTAATGGGCAAAATGGCAAAGAAGTGACATTCAGGGAAGTGGAAAGTGGATTTTCAAATGTGATAAAGCCATCGGTTCAGTCATTAACGTTTTCTGCTTTAGAAAATAGTAGACCGACATGGGAAATTAAAAGTAGACATGAACCAATGACTCAACCATCTTTAAACATGTGTCTGGGAAATCCGTCTGGGAGCAACTTGGTACTGCCTTCAGCAACTGAGATTGCAGAAGGAAGACTTGAGAGCAAAGCCTCCAACTTTCAACAAAGATCTCGGCCCATATTGCCCAAACCATCAAAGACTGGACTTACAATGAATGTGGAAACAGACAAAGGCTCAACTTCTCAGGCACGCATTGCTCGACCACCTGCCGAGGGGAGGGGCAAAAACCAGTTGCTTCCTCGATACTGGCCCAGGATTACTGATCAAGAACTGGAGCGGTTGTCTGGAGATTTGAAGTCCACTGTAGTGCCGTTGTTTGAGAAGGTGTTGAGTGCTAGTGATGCTGGCCGAATTGGTCGACTTGTTCTCCCAAAAGCATGTGCCGAGGCTTATTTTCCTCATATTTCACAATCAGAAGGTCTTCCTTTACGGGTCCAAGACGTGAAGGGGAATGAATGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGTCGGATGTATGTATTGGAGGGTGTGACACCTTGCATACAGTCCATGCAATTACGTGCTGGTGATACGGTTACATTTAGTCGGATAGACCCTGGGGGTAAACTTGTTATGGGTTTCAGGAGGGCGACAAATTCTTCAGACACCCAGGATGCCTCTACATCTGCACAATCGAATGGCATTTCAACTACAGGAACCATCTCTGGTGGAACTGAGAATCTGCTATCAGGAAGTAATTATGCTGATCTTCTCCAGTCGGCGAAAGGGAATGGGGAACCTAATTCTAGTGGACATCCAGAACATCCACGTTCAGGTACTGGAGCTGCCGCTGTGCTTAAAACCGAAAATTGTGAGGAGATGATAAACAATCATTCCGTTAAGCAACCAATTCCAGTTTCAGAGAAGAAGAGGACTCGCAATATTGGGCCTAAAAGTAAGAGGTTGCTCATTGATAATGAAGATTCTATGGAGTTGAGACTTACCTGGGAAGAAGCACAGGACTTGCTTCGTCCGCCACCTAGTGTTAAGCCAAGTATTGTCACCATTGAGGACCAAATATTTGAAGAATATGATGAGCCCCCGGTTTTCGGAAAGAGGACTATTTTCAGTGCCTGTTCATCTGGGGGGAAGGAGCAGTGGGCTCAATGTGATGATTGCTCTAAATGGCGAAAGCTTCCCGTCGATGCTCTTCTTCCTCCCAAGTGGAATTGCTCTGAGAATGTTTGGGATGCAAGCAGGGCTTCATGTTCTGCTCCAGAGGAGATGAGTTCAAGGGAATTAGAAAATCTTCTGAGAACCAACAAAGATCTTAAGAAGCGGAGAATTGCTGAGAATAATAAACCAATCCAAGAGCATGAGCCTTCTGGGTTGGATGCTCTTGCCAGTGCTGCGGTTTTAGGAGACAATCTTGTTGATCCTGTGGAGTCATCAGCTGGAGCCACCACCAGACACCCTAGACACCGTCCCGGCTGCTCCTGTATTGTGTGCATTCAACCACCAAGTGGAAAGGGGAGACACAAGCCAACATGTACTTGCAATGTGTGCATGACTGTGAAGCGCCGGTTCAAAACCCTGATGCTTAGAAAGAAGAAGCGCCAATCGGAGCGCGAAGCAGATGCTGCTCAAAAAGGTCATATTCCCCGAAAAGATGAGTCAGATACCAATGGAAGAGCTTCAAGAGATTATCCTAAACCGAGTCACTTGGACAAAGAGGGAGGACTAAACAAAGATCAACAACCAGCCCATGTGGGAGAGTCGAATGCCGGACAAATAGACCTGAACTCGCATCCGAATCGCGACGACATGGCAGCCGATACATCGGCGCCTTGCACCTCGAATCATCTTGAAACAACAAACCGAGAGGTAAGGAACTATATGAATCAAAATGGTGTTAGAAGCTACAATAATGGTGAAATGCAGGATAATCAGCATCCTTCTTTACTCAATCAATCTAATGGAGGGTGCTTTGGATCATCCATTGTGTGGAAAATGGAAAGAAAAGATGAGGTTTACAATCATGCCAATCAAAGTCAAAGCCATAGTCAAAACAACAATCTTTCTTGA 2961 0.4488 METCFHTPNPNATQQTEGDDETKRVQNHSHTQTTLRITRGGGVCVSSSVVHAFYASLALHALSLFSFSLFPFSLYTQTIPSSSIPSLPSLSTKSPKLNFGIEWVPTFASMCGFMEEWKREIIDTLSANEYSLFCNNFHRRETGWKECNFCNKPIHCGCIASKSLFEYLDFGGVGCVSCVNASQLRLTRNTENGSVSTTKNNASDRHSAHIDNRQFVSSVDEGKLMEFCRIVEASESSRWNHAQRDNIISCNGQNGKEVTFREVESGFSNVIKPSVQSLTFSALENSRPTWEIKSRHEPMTQPSLNMCLGNPSGSNLVLPSATEIAEGRLESKASNFQQRSRPILPKPSKTGLTMNVETDKGSTSQARIARPPAEGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHISQSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVTFSRIDPGGKLVMGFRRATNSSDTQDASTSAQSNGISTTGTISGGTENLLSGSNYADLLQSAKGNGEPNSSGHPEHPRSGTGAAAVLKTENCEEMINNHSVKQPIPVSEKKRTRNIGPKSKRLLIDNEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQIFEEYDEPPVFGKRTIFSACSSGGKEQWAQCDDCSKWRKLPVDALLPPKWNCSENVWDASRASCSAPEEMSSRELENLLRTNKDLKKRRIAENNKPIQEHEPSGLDALASAAVLGDNLVDPVESSAGATTRHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADAAQKGHIPRKDESDTNGRASRDYPKPSHLDKEGGLNKDQQPAHVGESNAGQIDLNSHPNRDDMAADTSAPCTSNHLETTNREVRNYMNQNGVRSYNNGEMQDNQHPSLLNQSNGGCFGSSIVWKMERKDEVYNHANQSQSHSQNNNLS 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00551 986 MobiDBLite consensus disorder prediction 829 875 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 825 918 - -
Adu01g00551 986 SMART B3_2 409 510 IPR003340 GO:0003677
Adu01g00551 986 MobiDBLite consensus disorder prediction 596 610 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 351 365 - -
Adu01g00551 986 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 126 938 - -
Adu01g00551 986 ProSiteProfiles Zinc finger CW-type profile. 673 723 IPR011124 GO:0008270
Adu01g00551 986 CDD B3_DNA 407 508 IPR003340 GO:0003677
Adu01g00551 986 Pfam CW-type Zinc Finger 678 720 IPR011124 GO:0008270
Adu01g00551 986 MobiDBLite consensus disorder prediction 589 610 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 337 379 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 550 573 - -
Adu01g00551 986 SUPERFAMILY DNA-binding pseudobarrel domain 407 509 IPR015300 -
Adu01g00551 986 MobiDBLite consensus disorder prediction 510 538 - -
Adu01g00551 986 Gene3D - 676 731 - -
Adu01g00551 986 Coils Coil 719 746 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 1 16 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 904 918 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 550 567 - -
Adu01g00551 986 MobiDBLite consensus disorder prediction 1 24 - -
Adu01g00551 986 Pfam B3 DNA binding domain 409 509 IPR003340 GO:0003677
Adu01g00551 986 MobiDBLite consensus disorder prediction 879 893 - -
Adu01g00551 986 ProSiteProfiles B3 DNA-binding domain profile. 409 510 IPR003340 GO:0003677
Adu01g00551 986 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 126 938 - -
Adu01g00551 986 Gene3D - 387 514 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00551 Adu-Chr1 7573800 7580903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00551 126 903 B3 DNA Binding Superfamily AT2G30470 49.746 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu01g00551 B3 1.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00551 - - gmx:100789848 1286.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00551 01 7573800 7580903 Adu01g00551 01 7573800 7580903 ECH