Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00535 ATGGACCCTGACATTGCGCGGTGGGTTGCGGAATTCCACCTCCGGAGTTCCGCCCCCGATTCCCTCGTCTCCAAGATCCTTAGGGTCCTTAATCTCTCCGGCGCCGATCCCAAACTTAAGAAAACCCTACTCCTCCGCACCCTCCGATCCCAACTCTGCAATGCCTCAATCACCGAAACCGCTCTCGAGATACTGGAGCAAATCGAAGCGATTGACCGAAACGACGCCGTTCCGATCATCGATTCCATGCGCAGAGCCTACTGCGCCGTCGCCGTCGAGTGCACCGTCAAATTCCTCCCCGCCTCCTACGACGGGACCACCAGCGGTGAGTACTTATCCGCGGTGACGCGTATCTGGCGCGGCCGCGTGGAGGAGCTGGAGCAGCGCCAGAGCGAGCTGTTCTTCGACGAGATTGCGCGATGGAGGGACGACATTGAGGCCGCTCTTTTTGACACTAGGGTTTCTGATAGGTTGAAGGAGTTGAATACCCGAAACGACGCGTTTACTGAAGTTAGGTTTTATCTGCAGGAAGTGTGGGAAACAATGGGTCCTTCTTTTCTTGAATCGGTAGCAGAAATGACAAAGAACAAAGGAAAGACGAAAGGCAAGGGGAAAGAATTGCCGAATGTGATTTTGAATCCTGTGCCGGAGACTAGAGTGGTAGGGTGTACGACAGGTGTTTGCAGAAATGCCTCTGGTGCTGAACAGGCAAGGGATCATGGTGTTGATGACAATGGTGACGACGACAATGATGGTTCACGTTGCATGGACGGTGTGGAGGTGAAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCCTGCAAAGGAGAAGAAAGCAAGAGGCAATCCTCTTCAACGCAAGCCGCCTGCATTTCGTAGATGCAGTAGAGGAGTTAAAATGTCTAGTGCTGAGGAATTGGGGACAGAAAGATCATGGAGAAAAAATGATACTGTGCTAAGTGGAGAAGTTAAAACGGCCCGAGAATCTCTTAAATCAAGTTTTTCAGAGCTACGAGCATTGGTCAATGATCCTCTTCCTGAGGCATTAGATATATCTGATGCTGTTAGATCTAAACTTGCACGGAAAGGTACAAATCATGAACAGCCAATGGAAAACCATAGCAGAGATGTAGATGTACCAAACTCAAATACTTGCATGGCTATTATTCCTTATCAACCTAAAGATGCCGAGCACAAGAAGTTGCCTTCTGTTCATCATAGTAGAGTTAATGCTGAACGTCCGAATTCAATTGAGCCGAACAATACTGCTCATAAAAGACCCAGTTTGATGGAGCCGAATGGTACTTCTCAAACTTATGAGTGGAATGATTCAATAGAAAACATGCCCAATGGAATGCAGCTAAGAAGGAAGAAAAGAAAATGGTCTTCATTGGAAGAGGAGACACTAAGGACTGGCGTACAAATGTTTGGTGCAGGAAATTGGAAAACAATTCAAAGTTTTTACAGTGATGTATTTGAACATAGACTAGCAGTTGATTTGAAGGACAAGTGGAGAAACATGATGCGGTATTGA 1536 0.4759 MDPDIARWVAEFHLRSSAPDSLVSKILRVLNLSGADPKLKKTLLLRTLRSQLCNASITETALEILEQIEAIDRNDAVPIIDSMRRAYCAVAVECTVKFLPASYDGTTSGEYLSAVTRIWRGRVEELEQRQSELFFDEIARWRDDIEAALFDTRVSDRLKELNTRNDAFTEVRFYLQEVWETMGPSFLESVAEMTKNKGKTKGKGKELPNVILNPVPETRVVGCTTGVCRNASGAEQARDHGVDDNGDDDNDGSRCMDGVEVKRAEGSVDGTQEPAKEKKARGNPLQRKPPAFRRCSRGVKMSSAEELGTERSWRKNDTVLSGEVKTARESLKSSFSELRALVNDPLPEALDISDAVRSKLARKGTNHEQPMENHSRDVDVPNSNTCMAIIPYQPKDAEHKKLPSVHHSRVNAERPNSIEPNNTAHKRPSLMEPNGTSQTYEWNDSIENMPNGMQLRRKKRKWSSLEEETLRTGVQMFGAGNWKTIQSFYSDVFEHRLAVDLKDKWRNMMRY 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00535 511 ProSiteProfiles Myb-like domain profile. 454 509 IPR001005 -
Adu01g00535 511 Pfam Myb-like DNA-binding domain 459 508 IPR001005 -
Adu01g00535 511 MobiDBLite consensus disorder prediction 413 436 - -
Adu01g00535 511 CDD SANT_TRF 460 510 - -
Adu01g00535 511 MobiDBLite consensus disorder prediction 360 382 - -
Adu01g00535 511 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 456 511 IPR017930 -
Adu01g00535 511 PANTHER MYB TRANSCRIPTION FACTOR 1 511 - -
Adu01g00535 511 SUPERFAMILY Homeodomain-like 456 510 IPR009057 -
Adu01g00535 511 MobiDBLite consensus disorder prediction 234 309 - -
Adu01g00535 511 MobiDBLite consensus disorder prediction 360 375 - -
Adu01g00535 511 Gene3D - 462 511 - -
Adu01g00535 511 PANTHER MYB TRANSCRIPTION FACTOR 1 511 - -
Adu01g00535 511 MobiDBLite consensus disorder prediction 236 284 - -
Adu01g00535 511 SMART sant 458 511 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00535 Adu-Chr1 7322462 7326229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00535 462 509 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 1.08e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g00535 Myb_DNA-binding 5.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00535 - K11111 ahf:112794013 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00535 01 7322462 7326229 Adu01g00535 01 7322462 7326229 ECH