Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00534 ATGATTTCAGGATTTACTATCAACTTTGACAAATCTGTCATCATCTCGGTAGATTGGGTCCTTAATCTCTCTGGCGCCGATCCCAACCTTAAGAAAACCCTACTCCTCCGCACCCTCCGATCCCAACTCTGCAATGCCTCAATCACCGAAACCGCTCTCGAGATACTGGAGCAAATCGAAGCGATTGACCGAAACGACGCCGTTCCGATTATCGATTCCATGCGCAGGGCCTACTGCGCCGTCGCCGTCGAGTGCACCGTCAAGTACCTCGCCGCCTCCTACGACGGCACCACCAGCGGTAAGTACTTATCCGCGGTGACGCGTATCTGGCGCGGCCGCGTGGAGGAGTTGGAGCAGGGCCAGAGCGAGCTGTTCTTCGACGAGACTGCGCGATGGAGGGACGACATTGAGGCCGCACTTTTTGACACTAGGGTTTCTGATAGGTTGAAGGAGTTGAATACCCGAAACGACGCGTTTACTGAAGTTAGGTTTTATCTGCAGGAAGTGTGGGAAACAATGGGTCCTTCTTTTCTTGAATCGGTAGCAGAAATGACAAAGAACAAGGGAAAGACGAAGGGTAAGGGGAAAGGATTGCCGAATGTGATTTTGAATCCGGCGCCGGTGACTATAGTGCCAGGGTATACTACAGGTGTTTGCAGAAATGCCTCTGGTGCTGAACAGGCAAGGGATCATGGTGTTGATGACAATGGTGACGGAGGCAATGATGGTTCACGTTGCATGGACGGTGTGGAGGTGAAGAGAGCTGAAGGTTCTGTTGATGGAACCCAGGAGCATGCAAAGAAGAAGAAAGCAAGAGGCAATCCTCAACTTAAACGCAAGCCGCCTGCATTTCGTAGATGCAGTAGAGGAGTTAAAATGTCTAGTGCTGAGGAATTGGGGACAGAAAGGTCATGGAGAAAAAATGATACTGTGCTAAGTGGAGAAGTTAAAACGGCCCGAGAATCTCTTAAATCAAGTTCTTCGGAGCTACGGGCATTGGTCAATGATCCTCTTCTTGAGGCATTGGATATACCTGACGCTGTTAGATCTAAACTTGCACGGAAAGGTACAAATCATGAACAGCCAATGGAAAACCATAGTGGAGATGTAGATGTACGAAACTCAAATACTTGCAGTACTATTAGTCCTTATCAACCTAATGATGCCGAGCACAAGAAGTCGCCTTCTGTTGAGCCGAACAAAACTGCTCATAAAAGACCCAATTTGATGGAGCCGAGTGGTACTTCTCAAACTTATGAGTGGAATGATTCAATAGAAAACATGCCCAATGGAATGCAGCCAAGAAGGAAGAAAAGGAAGAATAGAAAATGGTCTTCATTAGAAGAGGAGACACTAAGGACTGGTGTACAAATGTTTGGTGCAGGAAATTGGAAAACAATTCGAAGTTTTTACAGTGATGTATTTGAACATAGACTATCAGTTGATTTGAAGGACAAGTGGAGAAACATGATGCGGTAG 1479 0.4706 MISGFTINFDKSVIISVDWVLNLSGADPNLKKTLLLRTLRSQLCNASITETALEILEQIEAIDRNDAVPIIDSMRRAYCAVAVECTVKYLAASYDGTTSGKYLSAVTRIWRGRVEELEQGQSELFFDETARWRDDIEAALFDTRVSDRLKELNTRNDAFTEVRFYLQEVWETMGPSFLESVAEMTKNKGKTKGKGKGLPNVILNPAPVTIVPGYTTGVCRNASGAEQARDHGVDDNGDGGNDGSRCMDGVEVKRAEGSVDGTQEHAKKKKARGNPQLKRKPPAFRRCSRGVKMSSAEELGTERSWRKNDTVLSGEVKTARESLKSSSSELRALVNDPLLEALDIPDAVRSKLARKGTNHEQPMENHSGDVDVRNSNTCSTISPYQPNDAEHKKSPSVEPNKTAHKRPNLMEPSGTSQTYEWNDSIENMPNGMQPRRKKRKNRKWSSLEEETLRTGVQMFGAGNWKTIRSFYSDVFEHRLSVDLKDKWRNMMR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00534 492 MobiDBLite consensus disorder prediction 409 429 - -
Adu01g00534 492 ProSiteProfiles Myb-like domain profile. 436 491 IPR001005 -
Adu01g00534 492 PANTHER MYB TRANSCRIPTION FACTOR 10 492 - -
Adu01g00534 492 Pfam Myb-like DNA-binding domain 444 490 - -
Adu01g00534 492 SUPERFAMILY Homeodomain-like 439 491 IPR009057 -
Adu01g00534 492 SMART sant 440 492 IPR001005 -
Adu01g00534 492 MobiDBLite consensus disorder prediction 368 389 - -
Adu01g00534 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 436 492 IPR017930 -
Adu01g00534 492 PANTHER MYB TRANSCRIPTION FACTOR 10 492 - -
Adu01g00534 492 MobiDBLite consensus disorder prediction 247 270 - -
Adu01g00534 492 MobiDBLite consensus disorder prediction 353 367 - -
Adu01g00534 492 Gene3D - 444 492 - -
Adu01g00534 492 MobiDBLite consensus disorder prediction 225 303 - -
Adu01g00534 492 MobiDBLite consensus disorder prediction 353 446 - -
Adu01g00534 492 CDD SANT_TRF 444 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00534 Adu-Chr1 7293827 7299022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00534 385 491 Single Myb Histone (SMH) Gene Family AT1G15720 34.188 4.74e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g00534 Myb_DNA-bind_6 7.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00534 - K11111 ahf:112794013 888.256