Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00527 ATGGGGAATAACAAGTTCAAATTTTCAGATATGATACCAAATGGTTGGTTCTACAAACTGAGGGATATGAGCAAATCAAGGAAGAGAAACAATGCCTCTCATGTTATCAAGAACAAGAAAGTAACAACTTCAACTTCTCATCACTATTTCCCCATCGAACCAAGCAATAACAAAGCTGGTAAGTTCCATAACTCTCCTATTTACACAAAACATTCCGATTTTGTATTCGGCGATTCGCCAAGAAAGTCGTCCTCAAAGAGAAAAACTAAAAAGAAAACAATCTATGAGCCTTCTTCCCCGCCGATTGTTTCATCGCCGGTGTTAGAATCTTGGAGCTTTCATTCTCTAGAAAAGAAAAATAGTCCAAATTGGACTAAACCAAAACATGAAACAAGAGGATGCGATTCGTCGTCCGAGTCTGACTGCCACGAGTTTAACGCTCGTGGCAGCAGGCCTAATAGATTGGTAACCTCTGAATGTAGCTGCAGAGTCAGTTCTTCAACCAATGACATCATAATTGACATGAAGAGTGGATCAACGGACGCAATTTCGCCGTTAGGCCTTGCTCCAATCTTGACAAAGCCGGCGAAATTCGAAGAACAAATCTTCATAAATCCAACTCAAACATGTCTAGTATCTCGAAAATCTTCTGCTAATTCTAAAGGAATAAAGCTAAGAGTCAATTCTCCAAAACTCGCGAACCGGAAGGTTCAAGCCTATGCAAGAAGGAGTGTGTCATGCAAAGGATCAAACTCAAAGAATGCAGGTTTTCCGGAGGGGTTTGCCGTCGTTAAGTCGTCGGTCGATCCGCAGAAAGACTTCAGGGATTCAATGGTGGAGATGATCAGAGAGAATCAAATCCTTGCTTCCAAGGATTTGGAGAACCTTCTTGCCTGCTATCTTTCACTGAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATATGGTATGACATGGCTCAACTTAAATTGTAA 987 0.4083 MGNNKFKFSDMIPNGWFYKLRDMSKSRKRNNASHVIKNKKVTTSTSHHYFPIEPSNNKAGKFHNSPIYTKHSDFVFGDSPRKSSSKRKTKKKTIYEPSSPPIVSSPVLESWSFHSLEKKNSPNWTKPKHETRGCDSSSESDCHEFNARGSRPNRLVTSECSCRVSSSTNDIIIDMKSGSTDAISPLGLAPILTKPAKFEEQIFINPTQTCLVSRKSSANSKGIKLRVNSPKLANRKVQAYARRSVSCKGSNSKNAGFPEGFAVVKSSVDPQKDFRDSMVEMIRENQILASKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAQLKL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00527 328 Pfam Transcriptional repressor, ovate 267 323 IPR006458 -
Adu01g00527 328 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 326 IPR038933 GO:0045892
Adu01g00527 328 MobiDBLite consensus disorder prediction 73 102 - -
Adu01g00527 328 ProSiteProfiles OVATE domain profile. 263 322 IPR006458 -
Adu01g00527 328 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 261 323 IPR006458 -
Adu01g00527 328 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 326 - -
Adu01g00527 328 MobiDBLite consensus disorder prediction 118 149 - -
Adu01g00527 328 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Adu01g00527 328 MobiDBLite consensus disorder prediction 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00527 Adu-Chr1 7193420 7194406 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Adu01g00527 Ovate 4.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00527 - - adu:107474777 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00527 01 7193420 7194406 Adu01g00527 01 7193420 7194406 ECH
Adu01g00527 01 7193420 7194406 Adu07g01179 07 17755048 17756517 PCT