Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00509 ATGGAGAGGGAGGAGCTGAATTTGAGCAAAGAGAGTAATAACAACGGTGTTGGAGGTAACAACAGTAAGAGTGGCGTTGATGGCTTCATTGATAGAAGCAAAGTTAGGATTTTGTTGTGTGATAACGATTCCAATAGTTCCGAAGAGGTTTTTACTCTTCTAATTCGATGCTCTTATCAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGGAATGTTTTTGTTAAGAACTTAGCTGAATCCATAGATAATGCGGGATTACATGATTTATTTCAAAAGTTTGGAAATATCTTGTCCAGCTTTGGAAATTGCTTTGGTACTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCACGGGAAGGAGGTAATAGAATTGAGGTTGTGACTAATTGA 432 0.3958 MEREELNLSKESNNNGVGGNNSKSGVDGFIDRSKVRILLCDNDSNSSEEVFTLLIRCSYQVIRVMWSRRDPDVRKSGRGNVFVKNLAESIDNAGLHDLFQKFGNILSSFGNCFGTSNWFRGSDDSDTAEKPREGGNRIEVVTN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00509 143 PANTHER POLYADENYLATE-BINDING PROTEIN 60 109 - -
Adu01g00509 143 Gene3D - 68 134 IPR012677 -
Adu01g00509 143 PANTHER RNA BINDING PROTEIN 60 109 - -
Adu01g00509 143 MobiDBLite consensus disorder prediction 1 23 - -
Adu01g00509 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 81 107 IPR000504 GO:0003723
Adu01g00509 143 SUPERFAMILY RNA-binding domain, RBD 57 107 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00509 Adu-Chr1 7025107 7026372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00509 60 107 Eukaryotic Initiation Factors Gene Family AT2G36660 66.667 4.79e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00509 K13126 K12127 aip:110271131 170.244