Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00508 ATGAACAcgttgcctaatgtaAAAACGCCGAATAAAAAAACCTCTGCCGCTTCTCTAATCTCCCCGTCGTTGTGCTCTCCGTCGTCGTGCACCACTGTCACCGTCTCACTTGTCTGCTCGTCTCCCTTAGTTGCGCTTCTGCCGCCGTCCGTCCATCTTCGCAGCTCTCCCTTGAAAGGATGTGAAAACCCTAGCCTCCATCGCGCCGCCATCAATCTCACCGTCGCCGCTCGTCGCGCTCAAGATCGGCACCAGGTTCATCGTGGTCGTTCGCAATCCTCATGCGTCCCCGGCGTGTTCAGTCTTGCTGCATCCCGCGAGTGCTGGAGGGCCGCCACGTGCTCGGCATCGATGGAACTGGCAGCAGCAAGACCGTCGCTCTCGGCCTCCCGATCCTCCAGCCTGTCGGAGCACCCGTTTAGTGTGTTCGCGTTGGTGGTGACGCCCACTAGGGAACTGGCGTTCCAACTACCAGAGCAGTTCTGCGCCCTCGGTTCCTGCCTCCACCTCCGCATTGCAGTGGTTGTCAGCGGCATGGACATGCTTCGGCAAACCAAGGAGCTTGCTACTAGGCCCCACGTCGTTATTGCCATGCCGGGGAGGATCAAGGCCTTGCTCGAGAATCCTGATATTCCTCTAGTTTTTGCTAGAACTAAGTTCCGTGTCCTGGATGAAGCAGATCGAGTTCTTGATGTCAGTTTTCAGGAGGAATTGAAATTTATCTTTAAGTGCTTACCAGAAAATCCGCAAAATCTGTTCTTGTCTGCAACAACCACAAGTAATCTGCAAAGTTGTCTGAGCGTTACCAGGATAGACTGTATGTCTATGAGGCATATGAAGGCCTGA 846 0.5355 MNTLPNVKTPNKKTSAASLISPSLCSPSSCTTVTVSLVCSSPLVALLPPSVHLRSSPLKGCENPSLHRAAINLTVAARRAQDRHQVHRGRSQSSCVPGVFSLAASRECWRAATCSASMELAAARPSLSASRSSSLSEHPFSVFALVVTPTRELAFQLPEQFCALGSCLHLRIAVVVSGMDMLRQTKELATRPHVVIAMPGRIKALLENPDIPLVFARTKFRVLDEADRVLDVSFQEELKFIFKCLPENPQNLFLSATTTSNLQSCLSVTRIDCMSMRHMKA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00508 281 SMART ultradead3 97 271 IPR014001 -
Adu01g00508 281 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 222 230 IPR000629 -
Adu01g00508 281 PANTHER RNA HELICASE 134 268 - -
Adu01g00508 281 Pfam DEAD/DEAH box helicase 142 263 IPR011545 GO:0003676|GO:0005524
Adu01g00508 281 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 99 276 IPR014001 -
Adu01g00508 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 264 IPR027417 -
Adu01g00508 281 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 134 268 - -
Adu01g00508 281 Gene3D - 132 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00508 Adu-Chr1 7022723 7024782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00508 132 257 Eukaryotic Initiation Factors Gene Family AT3G13920 35.659 5.99e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00508 K14778 - gmx:100798597 207.994