Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00489 ATGAGAAGAAAAGAGCGTGAAGATTTAGAAGTGGGTTCTATGAGAATTTCACCactgaagctcgtcgtcacggtctcgcactctgtcgcgccttccctgcgctcgcttcgtcagcggcagaagcagacggaaccagcatctggtccctcgggcggtggtggtggtcgtcttctTGTTTCAGCCGTTAGTTCAGTTGGTCAACTTCCTCCACCGTCGGTCccagTGTGTGTGCATCATAGCTTAGTATATCTCATTGCCTCTAGAGTTCGGAGAGAAGAGATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCCGAGCGAAACTCGCAAGAGATGTCAGAACAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTTATCTCTGTACTTAGCAATGTACATTTTCATTACATCATAAGTCCTccacctctcttcaccacaacctccGGCGACAACCCACACCGTCGCGTCCCTTTCTCTTCTTCTTCCCCTCTTCTCACCTCCGCTGAGCCCAGAAACCACAGCGCCAGCTCCTCCTCTCCACCAAACAGCCGCGACACCCAACGTTCTCCGCAGGGTCCTTACGGCGTTCCAACCCGTCACCACTCCCCTGTCCGAACCCTACCTCCCCCAAAGCTCCCAGCAGCATTAGACAAGCCAAAATTTTCAAACAAGCCAAAATTTTCAAACAGCAGCATGAATCAAAACAGCAAAATTTTCAAACACCAGCATGAATCAAAACAAACCTAA 1149 0.3969 MRRKEREDLEVGSMRISPLKLVVTVSHSVAPSLRSLRQRQKQTEPASGPSGGGGGRLLVSAVSSVGQLPPPSVPVCVHHSLVYLIASRVRREEMAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVISVLSNVHFHYIISPPPLFTTTSGDNPHRRVPFSSSSPLLTSAEPRNHSASSSSPPNSRDTQRSPQGPYGVPTRHHSPVRTLPPPKLPAALDKPKFSNKPKFSNSSMNQNSKIFKHQHESKQT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00489 382 SUPERFAMILY PriA/YqbF domain 105 164 - -
Adu01g00489 382 MobiDBLite consensus disorder prediction 33 47 - -
Adu01g00489 382 MobiDBLite consensus disorder prediction 279 327 - -
Adu01g00489 382 MobiDBLite consensus disorder prediction 357 372 - -
Adu01g00489 382 Gene3D - 105 170 - -
Adu01g00489 382 Pfam GINS complex protein 147 255 IPR021151 -
Adu01g00489 382 MobiDBLite consensus disorder prediction 33 54 - -
Adu01g00489 382 MobiDBLite consensus disorder prediction 279 382 - -
Adu01g00489 382 CDD GINS_A_psf2 159 259 - -
Adu01g00489 382 Gene3D - 171 271 - -
Adu01g00489 382 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 94 266 IPR007257 GO:0005634|GO:0006260
Adu01g00489 382 SUPERFAMILY GINS helical bundle-like 166 266 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00489 Adu-Chr1 6739297 6753231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00489 94 240 Core DNA Replication Machinery Family AT3G12530 70.748 3.07e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00489 K10733 - gmx:100780528 296.589