Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00480 ATGAGAGTTTGGCCTGTACTTCTCATCTTGCTGTTGCAGCTTGTTGAACCCTCACATGGCCAGACAAAGAGCCAACAGAACAACACAGGGTTCCAGTGCAGTGGCAGAAGCTATCCATGCCAGGCCTATGCTTTCTACAGAGCTCAGAGTCAGTTTCTTGACCTAGCTTCCATTGGAGACCTCTTCCAAGTCAGCCGTCTCATGATTGCAAACCCAAGCAACATATCCTCTGATTCAGTTTCCTCTCCTCTAATTCAAAACCAGCAACTCTTTATTCCCTTAACATGTTCCTGCAACTCCGTCAACACCACCTTTGGTTCCATGTCTTATGCTAACATCTCCTATACCATCAAACCCAACGATACCTTCTTCTTAGTCTCCACCATCAAGTTTGAGAACCTCACTACCTACCCTTCTGTTGAGGTTGTTAACCCAAACCTTGTAGCAACCAACCTCCAAATTGGGGACAATGCTATATTCCCTGTCTTCTGCAAGTGCCCAGACAAGAACACAACTGTGTCCAACACAAGAGCCAATTACATGATCTCCTATGTTGTCCAACCGTCCGACAACCTATCTTCGATTGCTTCCAGGTTTGGATCTCAGCAGAAGGCCATCACTGATGTCAACGGGAACAAATTCAACGTCTATGATACCATATTCGTCCCGGTGACGAAGCTGCCGGTTCTATCACAGCCGAATACAAGTACTGCTGCTGCTCCTTCTCCTACTCCGGCCGGCAGCTCCGATGATAGGACAGGCACCGTGAGAGGGCTGGCAATTGGATTGGGGATTGCTGGTTTGCTGCTGATGGTGGTGTGTGCGGTGTGGTTGTATAGGGAGAGTGTGTTGAAGGGCAGGATGTGGGCGGGCAGGGACGAGGAGGAGCAGAGGCAGAAGGAAGGCAGGGTGTTTTCGGGAGGGAGAGATGGGAAAGTGAGTAAACCGATGGATGTGAAGCTGATGGCCAATGTGTCTGACTGCTTGGACAAGTACAGAGTCTTTGGAATTGAGGAACTTGTAGAAGCCACTGATGCCTTCAGTGACAGTTGCCTCATTCAAGGTTCTGTTTACAAAGGTACTATTGATGGAGAAACCTATGCAATCAAGAAGATGAAGTGGAATGCCTATGAGGAGCTCAAGATCTTACAGAAGGTAAACCATGGGAATCTGGTGAAGTTAGAAGGATTTTGCATAGACTCTGAAGAAGGGAATTGCTATCTAGTTTATGAGTACGTGGAGAATGGATCTTTGAACTGGTGGCTGCACGAAGAGGAAGGGAAGAATAAGGAGAAGCTAAACTGGAAGACAAGGGTGAGAATAGGCATAGACATAGCAAATGGTCTTCAATACATCCACGAGCACACAAGGCCAAGAGTAGTGCACAAAGACATAAAGAGCAGCAACATTCTGTTGGACTCAAACATGAGAGCCAAGATTGCCAACTTCGGCCTTGCCAAGTCAGGAATGAACGCAATTACAATGCACATTGTGGGAACTCAGGGCTACATTGCTCCTGAGTATCTGGCCGATGGCGTCGTCTCCACCAAGATGGATGTCTTCTCTTTCGGGGTGGTGCTCCTGGAGCTCATCTCTGGAAGGGAAGCCATCGACGAGGAGGGGAATCTACTGTGGATGAGTGCTATGAAGACCTTTGAAGGGGTAAGTAGTGATGAAGAGAAGGGTAGGAGGGTGAGGGAGTGGATGGACAAGGCAATGTTGAGGGACACAATCTCTATGGATAGTTTGTTGGGAGTTTTGGGGATTGCTATTGCTTGTTTGCATAAGGAGCCTTCAAAGAGGCCTAGCATAGTGGATGTTGTCTATGCTCTCTGCAAGAGTGATGATGCAGGGTTTGAAACCTCTGAGGATGGGATTGGATCCCCAAAGGTCACTGCTAGGGTTTTCCCAATACATGATCATCACATTCGTCATTCGCGAACATTGATACAAAGCTTGAAACATATCGATGATGATTCTATTGCAACTTCCTTGGCCCTTTCTTGCCAATCAATGCAAGAGTTTCGCGCTGGGGGACTCTTCATCAATGGCGGTGGCAACAATCACACAGCCTCTATTTTCTCACTTCTATTGTTAGATCTCATTCTTATCATCGTCGTCACTCGCATTCTTCGCATTCTTTTTAAGCCCCTCAAACAACCTGAACTGGTTTGTCAGATGATGGGTGGTATTATTCTTGGACCTTCTGTTTTGGGACGCCATGGATGGTTTAAACGTAATGTAATGCCTGAAGCAGCTGAATTCTTGGTGAACAATCTTGGAATAATGGGATTCATGTTCTTTGTTTTCATCTATGGTGTAAAGTGTGACCCAAGCCTGTTGAAAAAATCAGGGAAAATGCATTTGTACACGGCATTAGTTGGTATAAGCATTCCCTCAATGCTAACTTTTCTTGTGTCACTATACATGAGAAAAAACATGGACAAAGAACTTTCTAGAATAGCTTCACTAGGTGTAATTTCAGCGTACTTTGGGATCACAACATTCCCTGTTGTCCATAATATTTTGAAAGAGCTTAACCTTATAAACTCACATGTTGGGAGAATGGCTTTGTCTATGGCTTTAATTGGTGATGCAATTGGTACATGTTCAATTGTAGTATTTGAGGCTGGGAAACATGGAGAAACAGGAACAAAGCATGCAATTTGGTACACAATTTCTCTTGTACTGGTGCTAATGTTCATTATGTTTTGTGTAAGGCCCATGATGATGTGGATTCATAAGAACACCCCAGAAGGGCACCCAGTGGAACAATCTTATGTTGTTGTCATTCTTTTGGGTGTTTTTGTGTTGGGCTTTGTGACAGATATGCTTGGGATGGCAATTGCTAATGGGCCTTTGTGGTTGGGCCTTGTGATCCCTGATGGGCCTCCTTTAGGAGCAACAATAGTGGAAAAGAGTAAGACTATTATGACTGATTTTCTACTACCATTCTCATTCCTTATGGTGGGAACTCATACTGATGTGTTTGCTATGAGTGAGATTGATTGGTCTCATTTAGAACCATTGTTTTTCATGGTTTTAACTGGCTACTTGACCAAATTCTTTTCCACTTGGGTTGCTACATTCTATTGGCAGTTGCCATTTAGAGATGGACTTGCACTTAGCCTTATGATGAGCTTGAGAGGACAAGTTGAGCTCATAATGTTTGTCCATTTCATGGATAAGAAGATCATAAAGATACCAGGCTTCACATTATTAGTGCTTATGACAGCAGTTCTAACTGCAACATTCACTCCATTGATCTCCATAGTGTATGATCCAACAAGGCCATATATTGTGAACCAAAGAAGGAACATTCAGCATCACCTTCCAAACACTAAGCTTTCAATGGTTCTATGCATTCAAGATGATGAAAGCATAAATGGTCTCATCAATGTTCTTGACATATCAAATCCAAATCCAAATCGTCCCTTCATAGTTCACACTGTTCGATTATTCGAGCTTGTTGGCCGTGCTAGCCCTCTATTTATAGACCATGACAACCAAGAAATGCCTTCCAATTATCAATGGATGCACATTGTAAATGTTCTAAGGCGCTATCAAGAACTTAAAGGGAAATTTGTGGAGCTAAAGTTTTTCACAGTTGTTTCGCTGAAGCAAATGATGTTCCAAGACATTTGCTTGATTGCTTTAGAAAATGAAGCTTCTCTCATCATCTTACCTTTCAAGAAAACACATGTTTCTAACAAGGGCATGATCCATACTATAAACTCTCAAGTGTTGAATCATGCACCTTGCTCTGTTGGTATTCTTGTTGATAAAGGAAGTAATAATCTTATTGAAATGATGGCTGCAGCAAGAAATATTGCTGCTGCTCCTTCTTCCCTTCGTAGATTCGGACGGCGATATGCTATGCTATTTCTCGGAGGAGCAGACGCAAGAGAGGCTCTTGTTTATGCAGATATGATAGCTGCAAACCAAGATGCTTCTCTTACTGTGATTCGATTCTTGTCCGCAAACTATGTAGGGGACAAAGAAAGGGAGAAGAAGCTAGATGATGGAATTGTGACATGGTTTTGGGTTAAGAATGAGACAAACAACAGAGTGAGGTACAGAGAAGTGGTGGTTAAGAATGGAGAAGAAACAATTGCAAGTATTCTAGCTATGAATAATAATGATAATGATGGTGATGAAGATTATGATCTTTGGATAGTTGGAAGAAAACAAGGGATAAACCCTGTTCTTCTTACTGGGTTATCAGAATGGAGTGAGAGTGAAGAATTAGGACTCATAGGAGATTATATTGCTTCTGAAGATTTTCCAAGTTCTGGTTCTGTTTTAGTTATACATCAACAAATTCTCACCTCGGTTCACCGCCACCGCCGCCGCGCGTCTCGCCTCTCTTTTCCGTCTGTGCTCGGCTGCTCGCGTCTCGCCGCGCCTCCCTCGGCCAGTGAGTGCTCGAGCTGTGCGTGGTTTTTGCTGCCTGCACTGCGGCGTGCGTGTTTGTCTCTGCTCGATTCTGCCTCTGCAACAACAGGTGAGCATTTCAGGGTTTATGAATATGAATTGATTCTGCCTCTCAGTCACACTCACCGTTCGTCTCGTCTCGTCGCCGGCGTCTCAACATCTCGCGGCCTTCCCTGGGCTCCTCGTCGCTCGTTGTCTTCTGGTTTCGGGTCCTCTCCTATCGCCAAGTCGCCGTGGACCGTTGtgactcaAACAGAAAAAGACAAAAAAGACCCTGACCTAACCTCTCATCTCTTTTCTCGTCTCTTCTCCATTCGCTGCCTCTGCCACTCGGCTCTGCTCTTCTGCACTGTGTTTTTCCTCTTGCTGCCGGTCTCTGTTCTGAAAGTAAAGGAAGAAACATAG 4839 0.4433 MRVWPVLLILLLQLVEPSHGQTKSQQNNTGFQCSGRSYPCQAYAFYRAQSQFLDLASIGDLFQVSRLMIANPSNISSDSVSSPLIQNQQLFIPLTCSCNSVNTTFGSMSYANISYTIKPNDTFFLVSTIKFENLTTYPSVEVVNPNLVATNLQIGDNAIFPVFCKCPDKNTTVSNTRANYMISYVVQPSDNLSSIASRFGSQQKAITDVNGNKFNVYDTIFVPVTKLPVLSQPNTSTAAAPSPTPAGSSDDRTGTVRGLAIGLGIAGLLLMVVCAVWLYRESVLKGRMWAGRDEEEQRQKEGRVFSGGRDGKVSKPMDVKLMANVSDCLDKYRVFGIEELVEATDAFSDSCLIQGSVYKGTIDGETYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDSEEGNCYLVYEYVENGSLNWWLHEEEGKNKEKLNWKTRVRIGIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGREAIDEEGNLLWMSAMKTFEGVSSDEEKGRRVREWMDKAMLRDTISMDSLLGVLGIAIACLHKEPSKRPSIVDVVYALCKSDDAGFETSEDGIGSPKVTARVFPIHDHHIRHSRTLIQSLKHIDDDSIATSLALSCQSMQEFRAGGLFINGGGNNHTASIFSLLLLDLILIIVVTRILRILFKPLKQPELVCQMMGGIILGPSVLGRHGWFKRNVMPEAAEFLVNNLGIMGFMFFVFIYGVKCDPSLLKKSGKMHLYTALVGISIPSMLTFLVSLYMRKNMDKELSRIASLGVISAYFGITTFPVVHNILKELNLINSHVGRMALSMALIGDAIGTCSIVVFEAGKHGETGTKHAIWYTISLVLVLMFIMFCVRPMMMWIHKNTPEGHPVEQSYVVVILLGVFVLGFVTDMLGMAIANGPLWLGLVIPDGPPLGATIVEKSKTIMTDFLLPFSFLMVGTHTDVFAMSEIDWSHLEPLFFMVLTGYLTKFFSTWVATFYWQLPFRDGLALSLMMSLRGQVELIMFVHFMDKKIIKIPGFTLLVLMTAVLTATFTPLISIVYDPTRPYIVNQRRNIQHHLPNTKLSMVLCIQDDESINGLINVLDISNPNPNRPFIVHTVRLFELVGRASPLFIDHDNQEMPSNYQWMHIVNVLRRYQELKGKFVELKFFTVVSLKQMMFQDICLIALENEASLIILPFKKTHVSNKGMIHTINSQVLNHAPCSVGILVDKGSNNLIEMMAAARNIAAAPSSLRRFGRRYAMLFLGGADAREALVYADMIAANQDASLTVIRFLSANYVGDKEREKKLDDGIVTWFWVKNETNNRVRYREVVVKNGEETIASILAMNNNDNDGDEDYDLWIVGRKQGINPVLLTGLSEWSESEELGLIGDYIASEDFPSSGSVLVIHQQILTSVHRHRRRASRLSFPSVLGCSRLAAPPSASECSSCAWFLLPALRRACLSLLDSASATTGEHFRVYEYELILPLSHTHRSSRLVAGVSTSRGLPWAPRRSLSSGFGSSPIAKSPWTVVTQTEKDKKDPDLTSHLFSRLFSIRCLCHSALLFCTVFFLLLPVSVLKVKEET 1612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00480 1612 Pfam Protein kinase domain 355 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00480 1612 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 667 1443 - -
Adu01g00480 1612 SMART serkin_6 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00480 1612 CDD LysM 182 222 IPR018392 -
Adu01g00480 1612 MobiDBLite consensus disorder prediction 233 251 - -
Adu01g00480 1612 Pfam LysM domain 184 221 IPR018392 -
Adu01g00480 1612 Pfam Sodium/hydrogen exchanger family 702 1088 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Adu01g00480 1612 SUPERFAMILY Protein kinase-like (PK-like) 335 611 IPR011009 -
Adu01g00480 1612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Adu01g00480 1612 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Adu01g00480 1612 Gene3D - 695 1097 IPR038770 -
Adu01g00480 1612 PANTHER CATION/H + ANTIPORTER 667 1443 - -
Adu01g00480 1612 ProSiteProfiles Protein kinase domain profile. 299 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00480 1612 ProSiteProfiles LysM domain profile. 182 229 IPR018392 -
Adu01g00480 1612 Gene3D LysM domain 181 223 IPR036779 -
Adu01g00480 1612 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Adu01g00480 1612 SMART LysM_2 183 223 IPR018392 -
Adu01g00480 1612 SMART LysM_2 114 161 IPR018392 -
Adu01g00480 1612 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00480 Adu-Chr1 6654966 6666335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00480 634 1441 Antiporter Super Family AT5G37060 40.167 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Adu01g00480 Na_H_Exchanger 2.9e-40 CL0064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00480 - - ahf:112793168 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00480 01 6654966 6666335 Adu01g00480 01 6654966 6666335 ECH