Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00458 ATGAGCTATGAAGTCCGAAAAGATAGGAAAGAGTTTCTATGCATTTGCAGTAGCAAAATTAAAATTGACCAAGTTGGACTTCTTAAAGATGTTAGTGATTTTGTTTATTCAAAGGCAGTTCAGTTTTTCCTAGAACTGAAATCAAATGAAAATAAATATCCTTCAGCTTTGGATCCTGTGGAAGCAACATACCACAAATGGACTAAGTTGTTAGAAAAGATGTCTCAGAATCAATGTCATGGGTGTATAAAATTGGAAGAGCACCTAAAGTCAGCTAAAGAGATGAAGAAGCACAAAAAAGAAGTACATGCTCTTCAGTTTCAAATTTCTGATGATGCACTTCAACAGATGCCTGACTTTCAGGGCCAGATAGATGTGCGGAAGGAAATTGGATATATTGATAAAGACCTTGTTGTTCAAATGAAAGGACGTGTTGCCTGTGGGATGAATTCTGGGGAGGAGTTGATTTGCACTGATTACTTGTTTGAGAACCAACTGAATGATGATCTTGAACCAGAAGAAGCGGTGGCATTAATAGTTGTGCAGCCCCAAAAGTCATTGAAGAAGAAAGATCAGACATTTTCCCTTGTTGAATTCACTGCCGCCAAAACCGACTACCAAGATCCCATCGTGCTCCCCACCTGTCCGCGCCAGCACACTGCCAAGGAGCTCGACCGCGACCGCAACCGTCTTGGCGGCGGCTTCAGGTACTACGGCGGTGACCGCGCCAACAGAAGCTCCGGTGGTGGTGATGATTCCTCCAATTCGATTCCAACGGCGGTTCTGGTGGTCTTGGGTTTGAAAGAAAGAGGAAGTGGAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTATTTTGCAACCTCGTACAACGTCTGTGAACAATGAGAGCCAGGAGGGTGCTGGTAATGGTGATGGTAATGTGGTGAAACCAAAGGGTCCAAGCCCATTCGGCGAGGTGAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGGCTACTGAGAAAAAAGAGAGTTTTAGAAAGAGGGGTTTTGGTTCTGGCAATGGACAGACGAAGAAGCACAAAAAAGAAGTACATGCTCTTCAGTTTCAAATTTCTGATGATGCACTTCAAAAGATGCCTGACTTTCAGGGCCAGATAGATGTGCCGAAGAAAATTGGATATATTGATAAAGACCTTGTTGTTCAAATGAAATGGCGTGTTGCCTGTGGGATGAATTCTGGGAAGGAGTTGATTTGCACTGATTGCTTGTTTGAGAACCAACTGGATGATGATCTTGAACTAGAAGAAACGATGGCATTAATAGGTAAGCAGGACTATCCTAAGCTGTAA 1389 0.442 MSYEVRKDRKEFLCICSSKIKIDQVGLLKDVSDFVYSKAVQFFLELKSNENKYPSALDPVEATYHKWTKLLEKMSQNQCHGCIKLEEHLKSAKEMKKHKKEVHALQFQISDDALQQMPDFQGQIDVRKEIGYIDKDLVVQMKGRVACGMNSGEELICTDYLFENQLNDDLEPEEAVALIVVQPQKSLKKKDQTFSLVEFTAAKTDYQDPIVLPTCPRQHTAKELDRDRNRLGGGFRYYGGDRANRSSGGGDDSSNSIPTAVLVVLGLKERGSGSERSEGGGGRPRLILQPRTTSVNNESQEGAGNGDGNVVKPKGPSPFGEVRPREEVLAEKGQDWKKIDEQLESMKIKEATEKKESFRKRGFGSGNGQTKKHKKEVHALQFQISDDALQKMPDFQGQIDVPKKIGYIDKDLVVQMKWRVACGMNSGKELICTDCLFENQLDDDLELEETMALIGKQDYPKL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00458 462 MobiDBLite consensus disorder prediction 218 257 - -
Adu01g00458 462 MobiDBLite consensus disorder prediction 347 374 - -
Adu01g00458 462 MobiDBLite consensus disorder prediction 319 334 - -
Adu01g00458 462 PANTHER HELICASE SKI2W 8 192 - -
Adu01g00458 462 PANTHER HELICASE SKI2W 318 454 - -
Adu01g00458 462 MobiDBLite consensus disorder prediction 347 361 - -
Adu01g00458 462 Pfam Plant specific eukaryotic initiation factor 4B 278 355 IPR010433 GO:0003743
Adu01g00458 462 Pfam DSHCT (NUC185) domain 138 189 IPR012961 -
Adu01g00458 462 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 8 192 - -
Adu01g00458 462 Gene3D - 91 207 - -
Adu01g00458 462 Gene3D - 369 455 - -
Adu01g00458 462 MobiDBLite consensus disorder prediction 289 304 - -
Adu01g00458 462 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 318 454 - -
Adu01g00458 462 MobiDBLite consensus disorder prediction 270 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00458 Adu-Chr1 6391348 6396248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00458 280 369 Eukaryotic Initiation Factors Gene Family AT4G38710 49.541 1.82e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00458 K12599 - ahf:112795348 286.189