Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g00435 | ATGAACACTTTGAGTCAAATATTCCAAAACATGTTCTCAGACAACAGCAACATAATGCTTGCAGCCATAATATCTTTGCTCCTTGTAATCCTCTTTGTCCTTCTCCTCCATCTCTATGCTAAATGGTTCCTAGCTCAGGCTCAGGCTCAGGCAAATGCTCGCCGCCGCCGTCGTCGCCGCCGCAGAGCAGCCACAGTAACCGTTTCTGATGTTCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATTCACCAATATTCCCATCATCATCAAGTTCTCATCACAATACATCAAAAGGGTTAGATTCTTCTATCATTGCAAGAATTCCACTTTTCATTTATACTACTACTAATTCAGAAGTATTGAAAGGTAGTGAAGAAGTTGAGAATAGTGATGAGCTTGAGTGTGTGATTTGTTTGAGTTCTTTTGAAGATGGAGAGATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTTGATTGCATTGATATGTGGCTGAATTCTCATTCAAATTGTCCAATTTGCAGGGCTCCAATAATTCTTAGTAGTGGGATTGTTGTTGAGAATGATAATTCCCAATTAGGTTCTGTTATTGATGATGGGGGTGATCATAATGATCATGATCATGATCATGTTCATGTTCATAATGTTGATGATGGTAGTGGTGCCTCTGCTTTCGTTGAGATTGTGGTTGATGATTTTGGTCAAAGTTCTGAGATTAGAGAGAATAATGAAAATGGAGAAAGAGTGAGTAGTAGCAGTGATTCTTCTGTCTCAGAAACAGAAACCTCAACATCTTTGGTAATTGTTGGTTGTTCTTTGAAGAGAATGTTGAGCAAAGTTTTTCCATCTTCTAATAATGCAAATGTAAATGAATTACAAACTTAG | 906 | 0.3885 | MNTLSQIFQNMFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRRAATVTVSDVLGPARFHHFHSFNIEDSPIFPSSSSSHHNTSKGLDSSIIARIPLFIYTTTNSEVLKGSEEVENSDELECVICLSSFEDGEMGRCLPKCGHGFHVDCIDMWLNSHSNCPICRAPIILSSGIVVENDNSQLGSVIDDGGDHNDHDHDHVHVHNVDDGSGASAFVEIVVDDFGQSSEIRENNENGERVSSSSDSSVSETETSTSLVIVGCSLKRMLSKVFPSSNNANVNELQT | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g00435 | 301 | CDD | RING-H2_EL5_like | 139 | 182 | - | - | |
Adu01g00435 | 301 | ProSiteProfiles | Zinc finger RING-type profile. | 140 | 182 | IPR001841 | - | |
Adu01g00435 | 301 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 2 | 295 | IPR044675 | - | |
Adu01g00435 | 301 | SUPERFAMILY | RING/U-box | 128 | 188 | - | - | |
Adu01g00435 | 301 | SMART | ring_2 | 140 | 181 | IPR001841 | - | |
Adu01g00435 | 301 | MobiDBLite | consensus disorder prediction | 243 | 266 | - | - | |
Adu01g00435 | 301 | Pfam | Ring finger domain | 139 | 182 | IPR001841 | - | |
Adu01g00435 | 301 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 186 | IPR013083 | - | |
Adu01g00435 | 301 | PANTHER | - | 2 | 295 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g00435 | Adu-Chr1 | 5945059 | 5946245 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g00435 | 12 | 191 | Rapid Response to Elicitors | AT3G16720 | 37.222 | 7.53e-30 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g00435 | - | - | adu:107473099 | 483.026 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g00435 | 01 | 5945059 | 5946245 | Adu01g00435 | 01 | 5945059 | 5946245 | ECH | |
Adu01g00435 | 01 | 5945059 | 5946245 | Adu07g01344 | 07 | 22884968 | 22885853 | PCT |