Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00435 ATGAACACTTTGAGTCAAATATTCCAAAACATGTTCTCAGACAACAGCAACATAATGCTTGCAGCCATAATATCTTTGCTCCTTGTAATCCTCTTTGTCCTTCTCCTCCATCTCTATGCTAAATGGTTCCTAGCTCAGGCTCAGGCTCAGGCAAATGCTCGCCGCCGCCGTCGTCGCCGCCGCAGAGCAGCCACAGTAACCGTTTCTGATGTTCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATTCACCAATATTCCCATCATCATCAAGTTCTCATCACAATACATCAAAAGGGTTAGATTCTTCTATCATTGCAAGAATTCCACTTTTCATTTATACTACTACTAATTCAGAAGTATTGAAAGGTAGTGAAGAAGTTGAGAATAGTGATGAGCTTGAGTGTGTGATTTGTTTGAGTTCTTTTGAAGATGGAGAGATGGGAAGGTGTTTACCAAAATGTGGACATGGTTTTCATGTTGATTGCATTGATATGTGGCTGAATTCTCATTCAAATTGTCCAATTTGCAGGGCTCCAATAATTCTTAGTAGTGGGATTGTTGTTGAGAATGATAATTCCCAATTAGGTTCTGTTATTGATGATGGGGGTGATCATAATGATCATGATCATGATCATGTTCATGTTCATAATGTTGATGATGGTAGTGGTGCCTCTGCTTTCGTTGAGATTGTGGTTGATGATTTTGGTCAAAGTTCTGAGATTAGAGAGAATAATGAAAATGGAGAAAGAGTGAGTAGTAGCAGTGATTCTTCTGTCTCAGAAACAGAAACCTCAACATCTTTGGTAATTGTTGGTTGTTCTTTGAAGAGAATGTTGAGCAAAGTTTTTCCATCTTCTAATAATGCAAATGTAAATGAATTACAAACTTAG 906 0.3885 MNTLSQIFQNMFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRRAATVTVSDVLGPARFHHFHSFNIEDSPIFPSSSSSHHNTSKGLDSSIIARIPLFIYTTTNSEVLKGSEEVENSDELECVICLSSFEDGEMGRCLPKCGHGFHVDCIDMWLNSHSNCPICRAPIILSSGIVVENDNSQLGSVIDDGGDHNDHDHDHVHVHNVDDGSGASAFVEIVVDDFGQSSEIRENNENGERVSSSSDSSVSETETSTSLVIVGCSLKRMLSKVFPSSNNANVNELQT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00435 301 CDD RING-H2_EL5_like 139 182 - -
Adu01g00435 301 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Adu01g00435 301 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 295 IPR044675 -
Adu01g00435 301 SUPERFAMILY RING/U-box 128 188 - -
Adu01g00435 301 SMART ring_2 140 181 IPR001841 -
Adu01g00435 301 MobiDBLite consensus disorder prediction 243 266 - -
Adu01g00435 301 Pfam Ring finger domain 139 182 IPR001841 -
Adu01g00435 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 186 IPR013083 -
Adu01g00435 301 PANTHER - 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00435 Adu-Chr1 5945059 5946245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00435 12 191 Rapid Response to Elicitors AT3G16720 37.222 7.53e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00435 - - adu:107473099 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00435 01 5945059 5946245 Adu01g00435 01 5945059 5946245 ECH
Adu01g00435 01 5945059 5946245 Adu07g01344 07 22884968 22885853 PCT