Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00429 ATGGCATTGGAAAATCTTCCTTTAATCATAAAGCTTAAAGTTTCTTCCAAACGAAAGCTTGACATAAATGAAAGCGTGGAGGTCAGGAGCATGGAGGAAGGCTTTCAGGGATCATGGCACCCGGGGAAAGTTGTCCATTCTGGGAGGCTGCAGCGCCATGTCAAATATGATAACATATTACTTGATGATGAGGTGAATTACCTTGTGGAAAAGGTGACTGTTCCGAAGGTATTGGATGGCGATAGCGACTCTTCAAATTGCAACATTCGTGGTTGGATTAGGCCGGTGCCTCCTAAGAGGGAATTTGAAAGTAGGGAACTTAAATTTGGTCTGTGTGTTGATGTGTACCATGAAGAAGCTTGGTGGGAAGGGGTTATATTTGATCACTGTGATGAAAAGCCAGAGAGGAGTGTATATTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCATCAAATGCGGATAACTTATGATTGGAATGAGGTTACTGGGGAGTGGCAGTCGAGAGGGAACTGGGTTTTTCTTGAAGTTCTTGAGGAGTATGAGAGGAAGATGTTTATTTCAGTTTCAGTGAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGACTTCGCCAAGATTAGGGAATGGACTTTTAATGAGAAAGAGTCATGGAAAGAAATGGTAATAGAGGTAGTTGATGATTACTTAAGGCTTACACTAGGAGAAGTTTGCTCCTCTTTAGATCTTCCAAGGAGTTTATTGAGAGAAACACCGGAGATGGAGTCGGTTGAATCTACAGCTAATGTTGACTTCAATCAGGAAGTTGATATGGCCAACTCTTTGGATGTTGCGAATTCTGCTGGCCAGTCGAGTAGCATTTGTATCACAACTGCTCATTGTGATGGTACCTCTGGTAATGTATTTGGTTCTGATGATGTGATTGCTGAACTCCCTATGGAAGAAGGTGAGTCATCAAATTTGTTGAACGCTGTTCAAAAGTGGCCTACCATTCAGGATCATGGGCTCAAAACTGTCCCTCAGAAAGAAGTTTCAATGCAGAAAGAACCGGCTACTGAAGTAATATTTAATGGAAGAAAACATACAAAGCTTCGCAGCTCAAATCAACAATGGGAACCTCTCAGATTGTCTGATGTTGAGTTATGTCCTGATGCTATTGAAGAATATGCACAGGCAGCTAAAAGGGCTTGCCCAGAAAAAGCACGAAAACATCTTGCGTATCTTGGATGGGAAATTGAGTGGACAAAGCATAAAGCAAGCTATAGGTACAGATATAGGTCGCCTGATAAAAAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACTCGGACATGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGAACCTATTCTTATTGATCAATCAGAAAAGAGTCAGGATCTAAATGATCAGAGTGCAATGCAACTTAGAGATGACAATCATCTTGCACCTATTCTTATTGATCAATCAGAAAAGAGTCATGATCTAAGTATTTTGCCACCAGTTGTGTCGTCTCCTGTGGATGAAGTTGCAGATGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATTTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGATTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCCCAACACTCCATGCAGCTTGCCTTTATTGTATTGAACAAAATGTTGCTAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTGGATTGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATAGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATGTACTCTCTTGGTTGATAGACAACAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCAGGCTCTGTTTAGCTGAAGGGAGAATAACCAGTGATGGAATCAAGTGTAATTGTTGTTTGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAACGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCAAAATATTTTCATAAAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGCTGATGAGGTCATTCCTGAAGGTGACTGGTTTTGCCCATCATGTCGATGTGCAGTTTGTGGCAAAAGGGACATAAAAGAAAAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAGATATAGTAAAAACTGGTTCTGCGGAAGCGACTGTAAAAAGATATATTTAGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCATTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCCGAGAGTAGTGATCCGTGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCTCAGTGATGCATGAATGTTTTGAGCCTCTAAAGGATCCTTCGTCTACCAGAGATCTCACGGAAGATGTTTTATTCAGTCGATGGTCAACACTTAATCGATTGAATTTCCATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTATGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGAACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTATGATGAATGAGCTTGAAAAGAGGCTCATGCAGTTGGGAGTGGAGAGGCTCGTTTTGCCTGCTGTTCCTAGTGTTGTAGATACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAAAGTTCGAGAGGTTACAGTTCTTGGACAATACCTTTTTAGATTTTCAGGATACCATCATGTGCCAGAAACTGCTGAAGATTCCATCTCCAGAGTCGGTTTTGTTAATAGAGTCCCAACAAAGGACACAGCATGTTTTGCCTGAAAACAAGTTAAATTTTGACGCTGATATGATATCTGGAGTATTACACCACGCAGAAGAAACTGACAAAGGAAAAAGAGAGAATTCACAAATCCACAATAATTGTGCTGGAAGCAATGATCATTGCAGTAATGGTGCCATTGACATTGAGCAAGTCACACCGGTGAATAAACCAAGTCCTGAGGATCAACAGAGCTCTATTGTAACACAAGCTGACAGTAATAATGGCTCACCATATAAGTGCTACTACAAAAGAAGGAAATACACAAAGTTTTAG 3672 0.4104 MALENLPLIIKLKVSSKRKLDINESVEVRSMEEGFQGSWHPGKVVHSGRLQRHVKYDNILLDDEVNYLVEKVTVPKVLDGDSDSSNCNIRGWIRPVPPKREFESRELKFGLCVDVYHEEAWWEGVIFDHCDEKPERSVYFPDLGDEMKIGVHQMRITYDWNEVTGEWQSRGNWVFLEVLEEYERKMFISVSVKQVWYDVRTKKDFAKIREWTFNEKESWKEMVIEVVDDYLRLTLGEVCSSLDLPRSLLRETPEMESVESTANVDFNQEVDMANSLDVANSAGQSSSICITTAHCDGTSGNVFGSDDVIAELPMEEGESSNLLNAVQKWPTIQDHGLKTVPQKEVSMQKEPATEVIFNGRKHTKLRSSNQQWEPLRLSDVELCPDAIEEYAQAAKRACPEKARKHLAYLGWEIEWTKHKASYRYRYRSPDKKGVYYSLSRVCKYVAQNSDMNPLPSQNDQSMMQLTADNHLEPILIDQSEKSQDLNDQSAMQLRDDNHLAPILIDQSEKSHDLSILPPVVSSPVDEVADEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLPTLHAACLYCIEQNVAKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLDCMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNRLPRRVLRSNKRVQKVSTPSLSHQKPQNVLSWLIDNNILLPRSKVSYKPKGRLCLAEGRITSDGIKCNCCLKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKTVEDHMTREAMAKPPKYFHKGENDNICSVCHYGGNLILCDQCPSSFHVTCLADEVIPEGDWFCPSCRCAVCGKRDIKEKEGDFLVCIQCEHKYHFKCLRTKYATNSRRYSKNWFCGSDCKKIYLGLHKLLGEPVSVGINNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALSVMHECFEPLKDPSSTRDLTEDVLFSRWSTLNRLNFHGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRIMMNELEKRLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTKFERLQFLDNTFLDFQDTIMCQKLLKIPSPESVLLIESQQRTQHVLPENKLNFDADMISGVLHHAEETDKGKRENSQIHNNCAGSNDHCSNGAIDIEQVTPVNKPSPEDQQSSIVTQADSNNGSPYKCYYKRRKYTKF 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00429 1223 SUPERFAMILY FYVE/PHD zinc finger 856 914 IPR011011 -
Adu01g00429 1223 MobiDBLite consensus disorder prediction 1185 1210 - -
Adu01g00429 1223 Pfam Agenet domain 24 98 IPR008395 -
Adu01g00429 1223 ProSiteProfiles Zinc finger PHD-type profile. 812 857 IPR019787 -
Adu01g00429 1223 Gene3D - 965 1109 - -
Adu01g00429 1223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 857 910 IPR013083 -
Adu01g00429 1223 SUPERFAMILY FYVE/PHD zinc finger 790 855 IPR011011 -
Adu01g00429 1223 MobiDBLite consensus disorder prediction 1185 1209 - -
Adu01g00429 1223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 856 IPR013083 -
Adu01g00429 1223 CDD NAT_SF 1005 1065 - -
Adu01g00429 1223 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 494 1157 - -
Adu01g00429 1223 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 486 - -
Adu01g00429 1223 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 992 1094 IPR016181 -
Adu01g00429 1223 SMART PHD_3 856 908 IPR001965 -
Adu01g00429 1223 SMART PHD_3 814 855 IPR001965 -
Adu01g00429 1223 MobiDBLite consensus disorder prediction 653 679 - -
Adu01g00429 1223 Pfam PHD-finger 814 856 IPR019787 -
Adu01g00429 1223 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 965 1099 IPR000182 GO:0016407
Adu01g00429 1223 Pfam Tify domain binding domain 737 787 IPR032308 -
Adu01g00429 1223 PANTHER PHD ZINC FINGER PROTEIN 494 1157 - -
Adu01g00429 1223 PANTHER PHD ZINC FINGER PROTEIN 13 486 - -
Adu01g00429 1223 SMART ring_2 856 910 IPR001841 -
Adu01g00429 1223 SMART ring_2 815 854 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00429 Adu-Chr1 5751668 5760090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00429 29 447 PHD Transcription Factor Family AT5G58610 32.388 3.70e-63 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu01g00429 Agenet 9.6e-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00429 - - aip:107644722 2291.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00429 01 5751668 5760090 Adu01g00429 01 5751668 5760090 ECH