Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00416 ATGAAGACAACACCACCACCCTCTTATTCTTATCACACACACTCCTTCTTCTTAACCGTCATTCTCATCATAACCGCCGCAAATGCCATCGGCTCCGCATCCACCACCGCCGTCATCTACGCCTCATCTACAGTCTGCGCCATCGTTGCCGGCAACGACAAACAATACATCCACTGCTACCAACAAAACCAGCACAAGAATTCTCATTATTATTATGGAGATGTTGCACCGGTGGATGAGGTGGTTCCACACGTGTCCTTTGAATCCATCTCCGGCGGTCGAAACTTCTTCTGCGGTCTCCGGTCCGGTGGACTCAGCCTTCTTTGTTGGGACGTGTACGGCAGAGCATCGGTGTTGGTGTCGAAGAGGATCTTCCACAGTAAAATAGTGCAGTTAACCGATCTAACTGTTGGTGATTCTCAGGTTTGTGCTAGAGAGTCTCAATCTGGTGTGGTAAGGTGTTGGAGAGGAGGCCGCATTGAAAATGGATTCAAATTTTACTCACCTGGTAAGGACCTTAGGTTCAAAAGCATCACTTCAGGGTCTGGTTTCTCTTGTGGGGTATTAATGGATAATGGAAAGGTTCATTGTTGGGGTAACAACAATAGTAGTCAAATTCAAGCACAATTTGATAATATTTCTATGTCAAAGGTGATTGCTGGGGTGTCACATGTTTGTGGCTTAACAATCTATGATGGGTTCTTAATTTGCAAAGGGAACAATGATTCAGGCCAATTGGGTCCTAATTTAAATTCAAGTTCTTATTATTCAGAGTTTTCAGGACTTGCATTGGGAGAAGATTTCACTTGTGGTATTAGAAGAAAAAATGGATTTGTCCTATGTTGGGGTGGTGCTGAAAATACCAAAAAGTTTGATTTGTTTAATGATGTTTCTTTCGAGTCAATTGTAGCTGGTTTGGATTTTGTTTGTGGGGTAACAACCATGAATTTGTCTTTGATTTGTTGGGTCCTGGACAGTCAAATTCCACTAGCTATGCCATTGATTCTACCACCACCACTACCATCATCAACACAAGTTTCTAATGTTCATCACAAAAACATGAGGGTGATTTTGGTCATTTTGATTGTTGGATCAATTGGTGCTTTTTCTGGTTTATGCACTATTCTTTATTTCCTTTGGATTGGAGCTAAAAGACTATTCTTGAAGAAGAGAGATGTTGATAATTCAGAGCAACCTCAAAGAAATGATGATTCTGATGATGATGATGATGCCTATATTGAATTGGCTCCACTGCCGGCGAATCGCGCATCGAATGCAACATTAGGATCACTAAAGAGACATAGGAGTGTTGGTAGTTCATCGTCATCAAAGCATAATTTGGATAAGATTGAAAATTTTTCATTACATGAATTAGTCACAGCCACCGATAATTTTTCAAATGATAACAAGATAGGTTCTGGAAGCTTTGGCTCTGTATACAAAGGGAAGCTAGCCGATGATCGCGAAGTTGCCATCAAGAGAGGAGATATTGTTTCTAGCACAAAGAAGAAATTCCAAGAGAAGGAAATTGCATTTGATTCAGAATTGTCATTGTTATCGCGGCTTCATCACAAGCATCTTGTGAGACTAATAGGTTTCTGTGAGGAGAATGAAGAGAGGCTCTTGGTTTATGAGTACATGAGCAATGGATCAATCCATGAACATTTACATAACAAGAACAATGTTGAGAAAAATAGTAGCATTTTGAATTCTTGGAAGATGAGGATCAAAATTGCATTGGATGCTGCCAGGGGAATTGAGTACATTCACAACTATGCTGTTCCACCAATTATCCATAGAGATATCAAATCCTCAAATATACTATTGGACTCAAATTGGAATGCTAAGGTTTCTGATTTCGGATTGTCCCTTATTTTGCCAGAGATGGAACAAGATTCGACTCCTATAAAGGCGGTTGGCACAGTTGGTTACATAGATCCAGAATACTATGAATTGAATGTGTTAACAACAAAAAGTGATGTGTATGGTTTAGGAGTGGTTATGTTGGAGCTTCTAACGGGAAAAAGAGTTGTGTTCAAATTAGATGATGAGAGTAGTCCTATGGGAATAGTAGAATATGCAAGGCCAAGAATAGCAAAAGGGGAATTATGCAGTATTTTGGACTATAGAATTGAAAAACCTAATGTTAACGAGCTTGAGGCTCTTAAGATTATGACTTTCATTGCTATACATTGTGTGAATTTGGAGGGAAAAGAAAGGCCTGAAATGGCTGAAGTTGTTGCTAACTTAGAGAGGGCATCGGCTTTTTTGGAGGGTAGTTCTAGTACCAGCTTCTCTATTGTTTCATGTTCTAattag 2319 0.3984 MKTTPPPSYSYHTHSFFLTVILIITAANAIGSASTTAVIYASSTVCAIVAGNDKQYIHCYQQNQHKNSHYYYGDVAPVDEVVPHVSFESISGGRNFFCGLRSGGLSLLCWDVYGRASVLVSKRIFHSKIVQLTDLTVGDSQVCARESQSGVVRCWRGGRIENGFKFYSPGKDLRFKSITSGSGFSCGVLMDNGKVHCWGNNNSSQIQAQFDNISMSKVIAGVSHVCGLTIYDGFLICKGNNDSGQLGPNLNSSSYYSEFSGLALGEDFTCGIRRKNGFVLCWGGAENTKKFDLFNDVSFESIVAGLDFVCGVTTMNLSLICWVLDSQIPLAMPLILPPPLPSSTQVSNVHHKNMRVILVILIVGSIGAFSGLCTILYFLWIGAKRLFLKKRDVDNSEQPQRNDDSDDDDDAYIELAPLPANRASNATLGSLKRHRSVGSSSSSKHNLDKIENFSLHELVTATDNFSNDNKIGSGSFGSVYKGKLADDREVAIKRGDIVSSTKKKFQEKEIAFDSELSLLSRLHHKHLVRLIGFCEENEERLLVYEYMSNGSIHEHLHNKNNVEKNSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNAKVSDFGLSLILPEMEQDSTPIKAVGTVGYIDPEYYELNVLTTKSDVYGLGVVMLELLTGKRVVFKLDDESSPMGIVEYARPRIAKGELCSILDYRIEKPNVNELEALKIMTFIAIHCVNLEGKERPEMAEVVANLERASAFLEGSSSTSFSIVSCSN 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00416 772 CDD STKc_IRAK 471 752 - -
Adu01g00416 772 Gene3D Transferase(Phosphotransferase) domain 1 547 763 - -
Adu01g00416 772 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 13 338 - -
Adu01g00416 772 Pfam Regulator of chromosome condensation (RCC1) repeat 176 205 - -
Adu01g00416 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 328 764 IPR044815 GO:0004674
Adu01g00416 772 Gene3D Phosphorylase Kinase; domain 1 436 546 - -
Adu01g00416 772 SUPERFAMILY Protein kinase-like (PK-like) 440 751 IPR011009 -
Adu01g00416 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Adu01g00416 772 SMART serkin_6 465 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00416 772 SUPERFAMILY RCC1/BLIP-II 42 286 IPR009091 -
Adu01g00416 772 Pfam Protein kinase domain 466 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00416 772 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Adu01g00416 772 ProSiteProfiles Protein kinase domain profile. 465 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00416 772 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 328 764 - -
Adu01g00416 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 13 338 IPR044815 GO:0004674
Adu01g00416 772 Gene3D - 79 332 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00416 Adu-Chr1 5494593 5498386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00416 13 771 Receptor kinase-like Gene Family AT3G55950 45.048 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Adu01g00416 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00416 - - adu:107471365 813.142